Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.43□□□□□ -1.7
APOBEC1P41238 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.43□□□□□ -1.7
APOBEC1P41238 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
APOBEC1P41238 BNIP3P1-201ENST00000547295 580 ntBASIC4.43□□□□□ -1.7
APOBEC1P41238 EDDM3DP-201ENST00000554692 434 ntBASIC4.43□□□□□ -1.7
APOBEC1P41238 NIFKP8-201ENST00000560500 874 ntBASIC4.43□□□□□ -1.7
APOBEC1P41238 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.43□□□□□ -1.7
APOBEC1P41238 CCDC58P3-201ENST00000590792 430 ntBASIC4.43□□□□□ -1.7
APOBEC1P41238 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.43□□□□□ -1.7
APOBEC1P41238 AC243654.2-201ENST00000612843 443 ntBASIC4.43□□□□□ -1.7
APOBEC1P41238 AC015914.2-201ENST00000618167 288 ntBASIC4.43□□□□□ -1.7
APOBEC1P41238 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.43□□□□□ -1.7
APOBEC1P41238 CDRT1-208ENST00000630868 794 ntBASIC4.43□□□□□ -1.7
APOBEC1P41238 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.43□□□□□ -1.7
APOBEC1P41238 ZNF663P-202ENST00000641770 1131 ntBASIC4.43□□□□□ -1.7
APOBEC1P41238 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
APOBEC1P41238 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
APOBEC1P41238 INTS6P1-201ENST00000504674 2530 ntBASIC4.43□□□□□ -1.7
APOBEC1P41238 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.43□□□□□ -1.7
APOBEC1P41238 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
APOBEC1P41238 AL672167.1-204ENST00000641875 3017 ntBASIC4.43□□□□□ -1.7
APOBEC1P41238 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
APOBEC1P41238 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.43□□□□□ -1.7
APOBEC1P41238 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
APOBEC1P41238 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.42□□□□□ -1.7
APOBEC1P41238 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
APOBEC1P41238 AL022393.1-201ENST00000625142 1677 ntBASIC4.42□□□□□ -1.7
APOBEC1P41238 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
APOBEC1P41238 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
APOBEC1P41238 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
APOBEC1P41238 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
APOBEC1P41238 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
APOBEC1P41238 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
APOBEC1P41238 Y_RNA.472-201ENST00000384322 102 ntBASIC4.42□□□□□ -1.7
APOBEC1P41238 AL357515.1-201ENST00000402967 542 ntBASIC4.42□□□□□ -1.7
APOBEC1P41238 GSTM3P2-201ENST00000412746 530 ntBASIC4.42□□□□□ -1.7
APOBEC1P41238 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.42□□□□□ -1.7
APOBEC1P41238 TMBIM7P-201ENST00000418074 855 ntBASIC4.42□□□□□ -1.7
APOBEC1P41238 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
APOBEC1P41238 HIGD1AP12-201ENST00000427832 281 ntBASIC4.42□□□□□ -1.7
APOBEC1P41238 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.42□□□□□ -1.7
APOBEC1P41238 DYNLL1P7-201ENST00000429273 258 ntBASIC4.42□□□□□ -1.7
APOBEC1P41238 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.42□□□□□ -1.7
APOBEC1P41238 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.42□□□□□ -1.7
APOBEC1P41238 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.42□□□□□ -1.7
APOBEC1P41238 AL451139.1-201ENST00000434718 346 ntBASIC4.42□□□□□ -1.7
APOBEC1P41238 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.42□□□□□ -1.7
APOBEC1P41238 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
APOBEC1P41238 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.42□□□□□ -1.7
APOBEC1P41238 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.42□□□□□ -1.7
APOBEC1P41238 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.42□□□□□ -1.7
APOBEC1P41238 UBE2V1P5-201ENST00000440070 405 ntBASIC4.42□□□□□ -1.7
APOBEC1P41238 EEF1A1P39-201ENST00000440791 250 ntBASIC4.42□□□□□ -1.7
APOBEC1P41238 AL591719.1-201ENST00000444669 744 ntBASIC4.42□□□□□ -1.7
APOBEC1P41238 AC000111.2-201ENST00000448200 210 ntBASIC4.42□□□□□ -1.7
APOBEC1P41238 AC112492.1-201ENST00000449607 712 ntBASIC4.42□□□□□ -1.7
APOBEC1P41238 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.42□□□□□ -1.7
APOBEC1P41238 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.42□□□□□ -1.7
APOBEC1P41238 RPL10P17-201ENST00000453852 316 ntBASIC4.42□□□□□ -1.7
APOBEC1P41238 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.42□□□□□ -1.7
APOBEC1P41238 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.42□□□□□ -1.7
APOBEC1P41238 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
APOBEC1P41238 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.42□□□□□ -1.7
APOBEC1P41238 GAPDHP56-201ENST00000506031 988 ntBASIC4.42□□□□□ -1.7
APOBEC1P41238 AC114322.1-201ENST00000506771 926 ntBASIC4.42□□□□□ -1.7
APOBEC1P41238 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
APOBEC1P41238 RNU6-347P-201ENST00000516658 105 ntBASIC4.42□□□□□ -1.7
APOBEC1P41238 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.42□□□□□ -1.7
APOBEC1P41238 AC008562.1-201ENST00000521763 330 ntBASIC4.42□□□□□ -1.7
APOBEC1P41238 AC008033.2-201ENST00000542626 177 ntBASIC4.42□□□□□ -1.7
APOBEC1P41238 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.42□□□□□ -1.7
APOBEC1P41238 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.42□□□□□ -1.7
APOBEC1P41238 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.42□□□□□ -1.7
APOBEC1P41238 NTAN1P1-201ENST00000603150 646 ntBASIC4.42□□□□□ -1.7
APOBEC1P41238 PSMA6P4-201ENST00000603247 718 ntBASIC4.42□□□□□ -1.7
APOBEC1P41238 AC009643.2-201ENST00000603543 1448 ntBASIC4.42□□□□□ -1.7
APOBEC1P41238 AC113368.1-201ENST00000603736 382 ntBASIC4.42□□□□□ -1.7
APOBEC1P41238 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
APOBEC1P41238 MIR7155-201ENST00000615925 56 ntBASIC4.42□□□□□ -1.7
APOBEC1P41238 AC009159.2-201ENST00000617603 606 ntBASIC4.42□□□□□ -1.7
APOBEC1P41238 AL121890.2-201ENST00000617644 465 ntBASIC4.42□□□□□ -1.7
APOBEC1P41238 AC012414.7-202ENST00000622705 1090 ntBASIC4.42□□□□□ -1.7
APOBEC1P41238 AP000676.4-201ENST00000624659 623 ntBASIC4.42□□□□□ -1.7
APOBEC1P41238 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.42□□□□□ -1.7
APOBEC1P41238 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.42□□□□□ -1.7
APOBEC1P41238 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
APOBEC1P41238 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.42□□□□□ -1.7
APOBEC1P41238 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
APOBEC1P41238 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.42□□□□□ -1.7
APOBEC1P41238 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.42□□□□□ -1.7
APOBEC1P41238 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
APOBEC1P41238 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.42□□□□□ -1.7
APOBEC1P41238 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
APOBEC1P41238 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
APOBEC1P41238 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
APOBEC1P41238 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
APOBEC1P41238 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.41□□□□□ -1.7
APOBEC1P41238 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
APOBEC1P41238 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
APOBEC1P41238 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms