Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HADHAP40939 HMGB3P21-201ENST00000452483 547 ntBASIC4.91□□□□□ -1.62
HADHAP40939 HIGD1AP8-201ENST00000453927 274 ntBASIC4.91□□□□□ -1.62
HADHAP40939 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.91□□□□□ -1.62
HADHAP40939 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.91□□□□□ -1.62
HADHAP40939 RPL21P18-201ENST00000469899 480 ntBASIC4.91□□□□□ -1.62
HADHAP40939 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.91□□□□□ -1.62
HADHAP40939 OR52A4P-201ENST00000472867 958 ntBASIC4.91□□□□□ -1.62
HADHAP40939 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HADHAP40939 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.91□□□□□ -1.62
HADHAP40939 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.91□□□□□ -1.62
HADHAP40939 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
HADHAP40939 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.91□□□□□ -1.62
HADHAP40939 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.91□□□□□ -1.62
HADHAP40939 EDDM3DP-201ENST00000554692 434 ntBASIC4.91□□□□□ -1.62
HADHAP40939 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HADHAP40939 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.91□□□□□ -1.62
HADHAP40939 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.91□□□□□ -1.62
HADHAP40939 AC008507.2-201ENST00000588402 1176 ntBASIC4.91□□□□□ -1.62
HADHAP40939 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.91□□□□□ -1.62
HADHAP40939 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.91□□□□□ -1.62
HADHAP40939 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.91□□□□□ -1.62
HADHAP40939 SNORD91B-202ENST00000608459 222 ntBASIC4.91□□□□□ -1.62
HADHAP40939 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.91□□□□□ -1.62
HADHAP40939 AL391262.2-201ENST00000622466 494 ntBASIC4.91□□□□□ -1.62
HADHAP40939 CR381572.2-201ENST00000624852 397 ntBASIC4.91□□□□□ -1.62
HADHAP40939 AC092608.3-201ENST00000625017 386 ntBASIC4.91□□□□□ -1.62
HADHAP40939 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.91□□□□□ -1.62
HADHAP40939 LINC01808-202ENST00000641680 1116 ntBASIC4.91□□□□□ -1.62
HADHAP40939 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HADHAP40939 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
HADHAP40939 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
HADHAP40939 AC099654.2-201ENST00000433031 1980 ntBASIC4.91□□□□□ -1.62
HADHAP40939 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HADHAP40939 AC139713.2-215ENST00000641428 5037 ntBASIC4.9□□□□□ -1.62
HADHAP40939 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
HADHAP40939 CASC19-261ENST00000641853 1638 ntBASIC4.9□□□□□ -1.62
HADHAP40939 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HADHAP40939 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
HADHAP40939 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HADHAP40939 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
HADHAP40939 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
HADHAP40939 AL355143.1-201ENST00000407101 841 ntBASIC4.9□□□□□ -1.63
HADHAP40939 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.9□□□□□ -1.63
HADHAP40939 AC012519.1-201ENST00000424588 610 ntBASIC4.9□□□□□ -1.63
HADHAP40939 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.9□□□□□ -1.63
HADHAP40939 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HADHAP40939 RBMY2QP-201ENST00000429799 1147 ntBASIC4.9□□□□□ -1.63
HADHAP40939 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.9□□□□□ -1.63
HADHAP40939 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.9□□□□□ -1.63
HADHAP40939 AC006466.1-201ENST00000438721 289 ntBASIC4.9□□□□□ -1.63
HADHAP40939 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.9□□□□□ -1.63
HADHAP40939 ARF4P4-201ENST00000439608 520 ntBASIC4.9□□□□□ -1.63
HADHAP40939 AL645931.1-201ENST00000439737 410 ntBASIC4.9□□□□□ -1.63
HADHAP40939 SEPT14P24-201ENST00000447236 180 ntBASIC4.9□□□□□ -1.63
HADHAP40939 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.9□□□□□ -1.63
HADHAP40939 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HADHAP40939 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.9□□□□□ -1.63
HADHAP40939 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.9□□□□□ -1.63
HADHAP40939 MTATP6P9-201ENST00000515039 680 ntBASIC4.9□□□□□ -1.63
HADHAP40939 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.9□□□□□ -1.63
HADHAP40939 AC019227.1-201ENST00000526902 510 ntBASIC4.9□□□□□ -1.63
HADHAP40939 AC124293.1-201ENST00000530034 493 ntBASIC4.9□□□□□ -1.63
HADHAP40939 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.9□□□□□ -1.63
HADHAP40939 HMGB3P26-201ENST00000560051 582 ntBASIC4.9□□□□□ -1.63
HADHAP40939 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.9□□□□□ -1.63
HADHAP40939 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.9□□□□□ -1.63
HADHAP40939 OR1F2P-201ENST00000570470 933 ntBASIC4.9□□□□□ -1.63
HADHAP40939 SNORA74C-1-201ENST00000580726 201 ntBASIC4.9□□□□□ -1.63
HADHAP40939 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.9□□□□□ -1.63
HADHAP40939 RN7SL622P-201ENST00000585292 275 ntBASIC4.9□□□□□ -1.63
HADHAP40939 AC011487.3-201ENST00000593607 453 ntBASIC4.9□□□□□ -1.63
HADHAP40939 VN1R88P-201ENST00000596787 292 ntBASIC4.9□□□□□ -1.63
HADHAP40939 AP002802.2-201ENST00000605877 235 ntBASIC4.9□□□□□ -1.63
HADHAP40939 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.9□□□□□ -1.63
HADHAP40939 AC124016.2-201ENST00000610058 665 ntBASIC4.9□□□□□ -1.63
HADHAP40939 RNU6-1192P-201ENST00000612197 107 ntBASIC4.9□□□□□ -1.63
HADHAP40939 RNU6-489P-201ENST00000618289 107 ntBASIC4.9□□□□□ -1.63
HADHAP40939 AC012414.7-202ENST00000622705 1090 ntBASIC4.9□□□□□ -1.63
HADHAP40939 AC112694.2-201ENST00000623697 768 ntBASIC4.9□□□□□ -1.63
HADHAP40939 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.9□□□□□ -1.63
HADHAP40939 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.9□□□□□ -1.63
HADHAP40939 AL590396.2-201ENST00000636511 1041 ntBASIC4.9□□□□□ -1.63
HADHAP40939 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HADHAP40939 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HADHAP40939 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HADHAP40939 AC008758.3-201ENST00000507003 1829 ntBASIC4.9□□□□□ -1.63
HADHAP40939 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HADHAP40939 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.9□□□□□ -1.63
HADHAP40939 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
HADHAP40939 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HADHAP40939 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HADHAP40939 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.89□□□□□ -1.63
HADHAP40939 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.89□□□□□ -1.63
HADHAP40939 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HADHAP40939 RN7SKP95-201ENST00000362860 303 ntBASIC4.89□□□□□ -1.63
HADHAP40939 SNORD65C-201ENST00000390962 71 ntBASIC4.89□□□□□ -1.63
HADHAP40939 RNU6-1000P-201ENST00000391066 106 ntBASIC4.89□□□□□ -1.63
HADHAP40939 AL592291.1-201ENST00000403830 352 ntBASIC4.89□□□□□ -1.63
HADHAP40939 MTATP6P31-201ENST00000406985 692 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms