Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HMGCLP35914 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HMGCLP35914 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
HMGCLP35914 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HMGCLP35914 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.33□□□□□ -1.72
HMGCLP35914 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HMGCLP35914 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HMGCLP35914 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HMGCLP35914 RNA5SP509-201ENST00000364577 119 ntBASIC4.33□□□□□ -1.72
HMGCLP35914 MIR421-201ENST00000365696 85 ntBASIC4.33□□□□□ -1.72
HMGCLP35914 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.33□□□□□ -1.72
HMGCLP35914 SNORA56-201ENST00000383966 129 ntBASIC4.33□□□□□ -1.72
HMGCLP35914 U3.22-201ENST00000391120 215 ntBASIC4.33□□□□□ -1.72
HMGCLP35914 HDGFP1-201ENST00000405943 252 ntBASIC4.33□□□□□ -1.72
HMGCLP35914 UBE2V1P15-201ENST00000407776 448 ntBASIC4.33□□□□□ -1.72
HMGCLP35914 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.33□□□□□ -1.72
HMGCLP35914 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.33□□□□□ -1.72
HMGCLP35914 AC099336.2-201ENST00000422457 254 ntBASIC4.33□□□□□ -1.72
HMGCLP35914 AC073464.3-201ENST00000422564 712 ntBASIC4.33□□□□□ -1.72
HMGCLP35914 PDSS1P1-201ENST00000422953 1114 ntBASIC4.33□□□□□ -1.72
HMGCLP35914 RBMY1KP-201ENST00000423480 476 ntBASIC4.33□□□□□ -1.72
HMGCLP35914 AL390879.2-203ENST00000426943 1121 ntBASIC4.33□□□□□ -1.72
HMGCLP35914 SKP1P3-201ENST00000429280 487 ntBASIC4.33□□□□□ -1.72
HMGCLP35914 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.33□□□□□ -1.72
HMGCLP35914 RPL23AP52-201ENST00000439311 478 ntBASIC4.33□□□□□ -1.72
HMGCLP35914 AL512326.1-201ENST00000443050 721 ntBASIC4.33□□□□□ -1.72
HMGCLP35914 EIF2S2P2-201ENST00000447161 982 ntBASIC4.33□□□□□ -1.72
HMGCLP35914 VN1R48P-201ENST00000448149 1036 ntBASIC4.33□□□□□ -1.72
HMGCLP35914 AL157884.3-201ENST00000448273 1184 ntBASIC4.33□□□□□ -1.72
HMGCLP35914 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.33□□□□□ -1.72
HMGCLP35914 RPL7P32-201ENST00000457119 744 ntBASIC4.33□□□□□ -1.72
HMGCLP35914 AC099560.2-201ENST00000457554 255 ntBASIC4.33□□□□□ -1.72
HMGCLP35914 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.33□□□□□ -1.72
HMGCLP35914 AC006463.2-201ENST00000473326 348 ntBASIC4.33□□□□□ -1.72
HMGCLP35914 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.33□□□□□ -1.72
HMGCLP35914 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.33□□□□□ -1.72
HMGCLP35914 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.33□□□□□ -1.72
HMGCLP35914 AC008694.2-201ENST00000517591 306 ntBASIC4.33□□□□□ -1.72
HMGCLP35914 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.33□□□□□ -1.72
HMGCLP35914 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.33□□□□□ -1.72
HMGCLP35914 PHBP17-201ENST00000528576 541 ntBASIC4.33□□□□□ -1.72
HMGCLP35914 AC009643.1-201ENST00000532030 391 ntBASIC4.33□□□□□ -1.72
HMGCLP35914 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.33□□□□□ -1.72
HMGCLP35914 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.33□□□□□ -1.72
HMGCLP35914 AC090515.3-201ENST00000560431 315 ntBASIC4.33□□□□□ -1.72
HMGCLP35914 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC4.33□□□□□ -1.72
HMGCLP35914 ELOCP28-201ENST00000590044 317 ntBASIC4.33□□□□□ -1.72
HMGCLP35914 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.33□□□□□ -1.72
HMGCLP35914 RMST_5.1-201ENST00000618704 126 ntBASIC4.33□□□□□ -1.72
HMGCLP35914 AC007546.1-201ENST00000619452 559 ntBASIC4.33□□□□□ -1.72
HMGCLP35914 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HMGCLP35914 AC019278.1-201ENST00000623516 479 ntBASIC4.33□□□□□ -1.72
HMGCLP35914 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.33□□□□□ -1.72
HMGCLP35914 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HMGCLP35914 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
HMGCLP35914 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
HMGCLP35914 BX005019.1-201ENST00000561881 1810 ntBASIC4.32□□□□□ -1.72
HMGCLP35914 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
HMGCLP35914 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.32□□□□□ -1.72
HMGCLP35914 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
HMGCLP35914 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
HMGCLP35914 Z73965.1-201ENST00000623412 2297 ntBASIC4.32□□□□□ -1.72
HMGCLP35914 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HMGCLP35914 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.32□□□□□ -1.72
HMGCLP35914 OR4K17-201ENST00000315543 1032 ntBASIC4.32□□□□□ -1.72
HMGCLP35914 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
HMGCLP35914 IGKV7-3-201ENST00000357453 298 ntBASIC4.32□□□□□ -1.72
HMGCLP35914 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HMGCLP35914 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.32□□□□□ -1.72
HMGCLP35914 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HMGCLP35914 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.32□□□□□ -1.72
HMGCLP35914 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.32□□□□□ -1.72
HMGCLP35914 AL606490.7-201ENST00000433136 191 ntBASIC4.32□□□□□ -1.72
HMGCLP35914 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.32□□□□□ -1.72
HMGCLP35914 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.32□□□□□ -1.72
HMGCLP35914 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.32□□□□□ -1.72
HMGCLP35914 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.32□□□□□ -1.72
HMGCLP35914 ABCF2P2-201ENST00000450549 296 ntBASIC4.32□□□□□ -1.72
HMGCLP35914 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
HMGCLP35914 AL353718.1-201ENST00000451028 517 ntBASIC4.32□□□□□ -1.72
HMGCLP35914 MTND6P32-201ENST00000457611 483 ntBASIC4.32□□□□□ -1.72
HMGCLP35914 AL049829.1-201ENST00000465411 156 ntBASIC4.32□□□□□ -1.72
HMGCLP35914 AC011276.1-201ENST00000469688 323 ntBASIC4.32□□□□□ -1.72
HMGCLP35914 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.32□□□□□ -1.72
HMGCLP35914 AC010374.1-201ENST00000503762 1237 ntBASIC4.32□□□□□ -1.72
HMGCLP35914 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.32□□□□□ -1.72
HMGCLP35914 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.32□□□□□ -1.72
HMGCLP35914 AC034205.1-201ENST00000520621 638 ntBASIC4.32□□□□□ -1.72
HMGCLP35914 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.32□□□□□ -1.72
HMGCLP35914 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.32□□□□□ -1.72
HMGCLP35914 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.32□□□□□ -1.72
HMGCLP35914 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.32□□□□□ -1.72
HMGCLP35914 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HMGCLP35914 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.32□□□□□ -1.72
HMGCLP35914 AL354984.3-201ENST00000604803 325 ntBASIC4.32□□□□□ -1.72
HMGCLP35914 AP004372.1-201ENST00000604842 844 ntBASIC4.32□□□□□ -1.72
HMGCLP35914 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.32□□□□□ -1.72
HMGCLP35914 AC026979.4-201ENST00000606555 645 ntBASIC4.32□□□□□ -1.72
HMGCLP35914 AL356490.1-201ENST00000623079 479 ntBASIC4.32□□□□□ -1.72
HMGCLP35914 MIR6715B-201ENST00000637172 77 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms