Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
RORAP35398 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.25□□□□□ -1.73
RORAP35398 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RORAP35398 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RORAP35398 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RORAP35398 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.25□□□□□ -1.73
RORAP35398 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RORAP35398 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RORAP35398 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
RORAP35398 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.24□□□□□ -1.73
RORAP35398 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RORAP35398 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RORAP35398 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.24□□□□□ -1.73
RORAP35398 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.24□□□□□ -1.73
RORAP35398 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RORAP35398 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RORAP35398 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.24□□□□□ -1.73
RORAP35398 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RORAP35398 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.24□□□□□ -1.73
RORAP35398 OR5P1P-201ENST00000299512 925 ntBASIC4.24□□□□□ -1.73
RORAP35398 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RORAP35398 MIR92A2-201ENST00000385299 75 ntBASIC4.24□□□□□ -1.73
RORAP35398 FCF1P5-201ENST00000406490 482 ntBASIC4.24□□□□□ -1.73
RORAP35398 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.24□□□□□ -1.73
RORAP35398 AC004448.2-201ENST00000422360 586 ntBASIC4.24□□□□□ -1.73
RORAP35398 Z74021.1-201ENST00000423610 407 ntBASIC4.24□□□□□ -1.73
RORAP35398 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.24□□□□□ -1.73
RORAP35398 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.24□□□□□ -1.73
RORAP35398 AC011998.1-201ENST00000433403 117 ntBASIC4.24□□□□□ -1.73
RORAP35398 Z85994.2-201ENST00000434327 452 ntBASIC4.24□□□□□ -1.73
RORAP35398 TPTE2P1-204ENST00000435256 593 ntBASIC4.24□□□□□ -1.73
RORAP35398 RPL7P33-201ENST00000444159 742 ntBASIC4.24□□□□□ -1.73
RORAP35398 CCRL1P1-201ENST00000449542 1053 ntBASIC4.24□□□□□ -1.73
RORAP35398 NDUFS5P3-201ENST00000450668 321 ntBASIC4.24□□□□□ -1.73
RORAP35398 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.24□□□□□ -1.73
RORAP35398 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.24□□□□□ -1.73
RORAP35398 AC025445.1-201ENST00000502728 300 ntBASIC4.24□□□□□ -1.73
RORAP35398 AC010627.1-201ENST00000503819 1294 ntBASIC4.24□□□□□ -1.73
RORAP35398 AC106806.2-201ENST00000509365 500 ntBASIC4.24□□□□□ -1.73
RORAP35398 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.24□□□□□ -1.73
RORAP35398 RNU6-347P-201ENST00000516658 105 ntBASIC4.24□□□□□ -1.73
RORAP35398 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.24□□□□□ -1.73
RORAP35398 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.24□□□□□ -1.73
RORAP35398 TOMM20P2-201ENST00000540082 421 ntBASIC4.24□□□□□ -1.73
RORAP35398 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.24□□□□□ -1.73
RORAP35398 MIR3939-201ENST00000582614 106 ntBASIC4.24□□□□□ -1.73
RORAP35398 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.24□□□□□ -1.73
RORAP35398 AC069366.1-201ENST00000583159 838 ntBASIC4.24□□□□□ -1.73
RORAP35398 IMMP1LP1-201ENST00000605170 488 ntBASIC4.24□□□□□ -1.73
RORAP35398 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.24□□□□□ -1.73
RORAP35398 AC114781.5-201ENST00000615297 108 ntBASIC4.24□□□□□ -1.73
RORAP35398 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4.24□□□□□ -1.73
RORAP35398 MIR6891-201ENST00000618788 93 ntBASIC4.24□□□□□ -1.73
RORAP35398 AC068831.8-201ENST00000620171 435 ntBASIC4.24□□□□□ -1.73
RORAP35398 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.24□□□□□ -1.73
RORAP35398 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.24□□□□□ -1.73
RORAP35398 OR2L1P-202ENST00000641567 1023 ntBASIC4.24□□□□□ -1.73
RORAP35398 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.24□□□□□ -1.73
RORAP35398 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
RORAP35398 AC087565.3-202ENST00000642085 1603 ntBASIC4.24□□□□□ -1.73
RORAP35398 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RORAP35398 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RORAP35398 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RORAP35398 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RORAP35398 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RORAP35398 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RORAP35398 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RORAP35398 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.23□□□□□ -1.73
RORAP35398 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RORAP35398 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.23□□□□□ -1.73
RORAP35398 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.23□□□□□ -1.73
RORAP35398 RPL31P20-201ENST00000449593 360 ntBASIC4.23□□□□□ -1.73
RORAP35398 NUTF2P7-201ENST00000453086 375 ntBASIC4.23□□□□□ -1.73
RORAP35398 DHFRP3-201ENST00000455595 559 ntBASIC4.23□□□□□ -1.73
RORAP35398 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.23□□□□□ -1.73
RORAP35398 RN7SL41P-201ENST00000476144 297 ntBASIC4.23□□□□□ -1.73
RORAP35398 S100A11P1-201ENST00000477525 312 ntBASIC4.23□□□□□ -1.73
RORAP35398 MTND3P6-201ENST00000485242 339 ntBASIC4.23□□□□□ -1.73
RORAP35398 RPS6P4-201ENST00000494693 758 ntBASIC4.23□□□□□ -1.73
RORAP35398 AC117525.1-201ENST00000515228 503 ntBASIC4.23□□□□□ -1.73
RORAP35398 SNORD116-26-201ENST00000516006 96 ntBASIC4.23□□□□□ -1.73
RORAP35398 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.23□□□□□ -1.73
RORAP35398 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.23□□□□□ -1.73
RORAP35398 AC090281.1-201ENST00000523019 276 ntBASIC4.23□□□□□ -1.73
RORAP35398 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.23□□□□□ -1.73
RORAP35398 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RORAP35398 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.23□□□□□ -1.73
RORAP35398 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.23□□□□□ -1.73
RORAP35398 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RORAP35398 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.23□□□□□ -1.73
RORAP35398 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
RORAP35398 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.23□□□□□ -1.73
RORAP35398 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.23□□□□□ -1.73
RORAP35398 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.23□□□□□ -1.73
RORAP35398 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.23□□□□□ -1.73
RORAP35398 AC026979.4-201ENST00000606555 645 ntBASIC4.23□□□□□ -1.73
RORAP35398 AL096803.3-201ENST00000609032 532 ntBASIC4.23□□□□□ -1.73
RORAP35398 AC140113.4-201ENST00000622087 222 ntBASIC4.23□□□□□ -1.73
RORAP35398 AC000123.2-201ENST00000623124 461 ntBASIC4.23□□□□□ -1.73
RORAP35398 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms