Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RFC4P35249 SNORA11C-201ENST00000408532 129 ntBASIC5.27□□□□□ -1.57
RFC4P35249 AC008280.1-201ENST00000418851 412 ntBASIC5.27□□□□□ -1.57
RFC4P35249 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.27□□□□□ -1.57
RFC4P35249 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.27□□□□□ -1.57
RFC4P35249 RPS4XP15-201ENST00000489210 795 ntBASIC5.27□□□□□ -1.57
RFC4P35249 AL139099.1-201ENST00000497398 403 ntBASIC5.27□□□□□ -1.57
RFC4P35249 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.27□□□□□ -1.57
RFC4P35249 RNA5SP303-201ENST00000516192 130 ntBASIC5.27□□□□□ -1.57
RFC4P35249 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.27□□□□□ -1.57
RFC4P35249 AP000619.3-201ENST00000535634 1127 ntBASIC5.27□□□□□ -1.57
RFC4P35249 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.27□□□□□ -1.57
RFC4P35249 CD24P2-201ENST00000565486 219 ntBASIC5.27□□□□□ -1.57
RFC4P35249 DPRXP4-201ENST00000578053 568 ntBASIC5.27□□□□□ -1.57
RFC4P35249 RN7SL339P-201ENST00000580597 296 ntBASIC5.27□□□□□ -1.57
RFC4P35249 AP005262.1-201ENST00000582646 997 ntBASIC5.27□□□□□ -1.57
RFC4P35249 AC010201.1-201ENST00000605051 540 ntBASIC5.27□□□□□ -1.57
RFC4P35249 AL592436.1-201ENST00000605135 558 ntBASIC5.27□□□□□ -1.57
RFC4P35249 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
RFC4P35249 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFC4P35249 AC116667.1-201ENST00000604855 2072 ntBASIC5.27□□□□□ -1.57
RFC4P35249 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFC4P35249 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFC4P35249 TCP1P3-201ENST00000414406 1498 ntBASIC5.26□□□□□ -1.57
RFC4P35249 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
RFC4P35249 AC000374.1-201ENST00000434698 1745 ntBASIC5.26□□□□□ -1.57
RFC4P35249 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.26□□□□□ -1.57
RFC4P35249 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RFC4P35249 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RFC4P35249 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RFC4P35249 RNU6-213P-201ENST00000384051 104 ntBASIC5.26□□□□□ -1.57
RFC4P35249 MIR1911-201ENST00000410783 80 ntBASIC5.26□□□□□ -1.57
RFC4P35249 OR6C64P-201ENST00000419708 825 ntBASIC5.26□□□□□ -1.57
RFC4P35249 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RFC4P35249 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.26□□□□□ -1.57
RFC4P35249 RAB9AP5-201ENST00000437794 597 ntBASIC5.26□□□□□ -1.57
RFC4P35249 RAB9AP2-201ENST00000443911 597 ntBASIC5.26□□□□□ -1.57
RFC4P35249 snoU13.24-201ENST00000458998 104 ntBASIC5.26□□□□□ -1.57
RFC4P35249 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.26□□□□□ -1.57
RFC4P35249 CCNG2P1-201ENST00000549521 1000 ntBASIC5.26□□□□□ -1.57
RFC4P35249 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5.26□□□□□ -1.57
RFC4P35249 RPL23AP97-201ENST00000568955 471 ntBASIC5.26□□□□□ -1.57
RFC4P35249 BNIP3P19-201ENST00000605397 577 ntBASIC5.26□□□□□ -1.57
RFC4P35249 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.26□□□□□ -1.57
RFC4P35249 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.26□□□□□ -1.57
RFC4P35249 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.26□□□□□ -1.57
RFC4P35249 AC084757.4-201ENST00000616350 526 ntBASIC5.26□□□□□ -1.57
RFC4P35249 AC015908.5-201ENST00000623289 343 ntBASIC5.26□□□□□ -1.57
RFC4P35249 AP002967.1-201ENST00000624203 539 ntBASIC5.26□□□□□ -1.57
RFC4P35249 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.26□□□□□ -1.57
RFC4P35249 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.26□□□□□ -1.57
RFC4P35249 AC009950.2-201ENST00000636548 183 ntBASIC5.26□□□□□ -1.57
RFC4P35249 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.26□□□□□ -1.57
RFC4P35249 AL672167.1-205ENST00000641112 3080 ntBASIC5.26□□□□□ -1.57
RFC4P35249 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.26□□□□□ -1.57
RFC4P35249 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RFC4P35249 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RFC4P35249 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.26□□□□□ -1.57
RFC4P35249 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RFC4P35249 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.26□□□□□ -1.57
RFC4P35249 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RFC4P35249 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RFC4P35249 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.25□□□□□ -1.57
RFC4P35249 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RFC4P35249 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.25□□□□□ -1.57
RFC4P35249 SETP15-201ENST00000412724 337 ntBASIC5.25□□□□□ -1.57
RFC4P35249 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.25□□□□□ -1.57
RFC4P35249 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.25□□□□□ -1.57
RFC4P35249 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RFC4P35249 AC104164.2-201ENST00000496953 495 ntBASIC5.25□□□□□ -1.57
RFC4P35249 RNU6-513P-201ENST00000516104 104 ntBASIC5.25□□□□□ -1.57
RFC4P35249 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.25□□□□□ -1.57
RFC4P35249 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.25□□□□□ -1.57
RFC4P35249 AC012314.7-201ENST00000619693 93 ntBASIC5.25□□□□□ -1.57
RFC4P35249 AC091953.5-201ENST00000622919 233 ntBASIC5.25□□□□□ -1.57
RFC4P35249 AC020978.9-201ENST00000624380 1141 ntBASIC5.25□□□□□ -1.57
RFC4P35249 PCAT14-202ENST00000627127 3935 ntBASIC5.25□□□□□ -1.57
RFC4P35249 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RFC4P35249 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.25□□□□□ -1.57
RFC4P35249 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RFC4P35249 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFC4P35249 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.24□□□□□ -1.57
RFC4P35249 RNU6-1331P-201ENST00000363658 106 ntBASIC5.24□□□□□ -1.57
RFC4P35249 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.24□□□□□ -1.57
RFC4P35249 RPS26P4-201ENST00000431743 355 ntBASIC5.24□□□□□ -1.57
RFC4P35249 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.24□□□□□ -1.57
RFC4P35249 RPS26P2-201ENST00000440331 348 ntBASIC5.24□□□□□ -1.57
RFC4P35249 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.24□□□□□ -1.57
RFC4P35249 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.24□□□□□ -1.57
RFC4P35249 DSTNP2-201ENST00000504533 515 ntBASIC5.24□□□□□ -1.57
RFC4P35249 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.24□□□□□ -1.57
RFC4P35249 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.24□□□□□ -1.57
RFC4P35249 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.24□□□□□ -1.57
RFC4P35249 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.24□□□□□ -1.57
RFC4P35249 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.24□□□□□ -1.57
RFC4P35249 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.24□□□□□ -1.57
RFC4P35249 AL137246.1-201ENST00000607072 977 ntBASIC5.24□□□□□ -1.57
RFC4P35249 AC019176.2-201ENST00000611579 315 ntBASIC5.24□□□□□ -1.57
RFC4P35249 HSPA8P17-201ENST00000427029 1382 ntBASIC5.24□□□□□ -1.57
RFC4P35249 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms