Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 RPS3AP3-201ENST00000411933 242 ntBASIC5.61□□□□□ -1.51
HOXC12P31275 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC12P31275 CCDC58P2-201ENST00000417131 366 ntBASIC5.61□□□□□ -1.51
HOXC12P31275 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXC12P31275 RPL21P50-201ENST00000417698 477 ntBASIC5.61□□□□□ -1.51
HOXC12P31275 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC12P31275 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXC12P31275 CHEK2P5-201ENST00000423877 246 ntBASIC5.61□□□□□ -1.51
HOXC12P31275 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.61□□□□□ -1.51
HOXC12P31275 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXC12P31275 SKP1P1-201ENST00000438081 489 ntBASIC5.61□□□□□ -1.51
HOXC12P31275 ELOCP10-201ENST00000440624 327 ntBASIC5.61□□□□□ -1.51
HOXC12P31275 CNOT7P2-201ENST00000441051 832 ntBASIC5.61□□□□□ -1.51
HOXC12P31275 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC12P31275 AL645936.1-201ENST00000441979 518 ntBASIC5.61□□□□□ -1.51
HOXC12P31275 OR7E125P-201ENST00000443450 846 ntBASIC5.61□□□□□ -1.51
HOXC12P31275 AL671855.1-201ENST00000446875 1203 ntBASIC5.61□□□□□ -1.51
HOXC12P31275 MTCO1P27-201ENST00000448269 226 ntBASIC5.61□□□□□ -1.51
HOXC12P31275 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXC12P31275 RNU6-1218P-201ENST00000458990 108 ntBASIC5.61□□□□□ -1.51
HOXC12P31275 AL672167.3-201ENST00000465951 960 ntBASIC5.61□□□□□ -1.51
HOXC12P31275 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXC12P31275 RPL23AP64-201ENST00000469465 435 ntBASIC5.61□□□□□ -1.51
HOXC12P31275 RPL12P31-201ENST00000478433 450 ntBASIC5.61□□□□□ -1.51
HOXC12P31275 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXC12P31275 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXC12P31275 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXC12P31275 AC108064.1-201ENST00000513791 460 ntBASIC5.61□□□□□ -1.51
HOXC12P31275 RNU6-430P-201ENST00000517078 107 ntBASIC5.61□□□□□ -1.51
HOXC12P31275 SOD1P3-201ENST00000518682 454 ntBASIC5.61□□□□□ -1.51
HOXC12P31275 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC12P31275 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXC12P31275 AL133399.1-201ENST00000527476 298 ntBASIC5.61□□□□□ -1.51
HOXC12P31275 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXC12P31275 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.61□□□□□ -1.51
HOXC12P31275 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXC12P31275 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXC12P31275 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXC12P31275 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXC12P31275 AP001180.3-201ENST00000582221 145 ntBASIC5.61□□□□□ -1.51
HOXC12P31275 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.61□□□□□ -1.51
HOXC12P31275 AC022916.3-201ENST00000592961 742 ntBASIC5.61□□□□□ -1.51
HOXC12P31275 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.61□□□□□ -1.51
HOXC12P31275 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXC12P31275 ELOCP34-201ENST00000604436 327 ntBASIC5.61□□□□□ -1.51
HOXC12P31275 AC015712.7-201ENST00000615211 635 ntBASIC5.61□□□□□ -1.51
HOXC12P31275 AL138820.1-201ENST00000617901 5305 ntBASIC5.61□□□□□ -1.51
HOXC12P31275 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXC12P31275 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXC12P31275 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXC12P31275 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC12P31275 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC12P31275 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC12P31275 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC12P31275 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.61□□□□□ -1.51
HOXC12P31275 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC12P31275 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC12P31275 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXC12P31275 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HOXC12P31275 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HOXC12P31275 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC12P31275 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC12P31275 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC12P31275 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
HOXC12P31275 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC12P31275 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC12P31275 AC016745.2-201ENST00000608834 3443 ntBASIC5.6□□□□□ -1.51
HOXC12P31275 CASC19-246ENST00000641625 1606 ntBASIC5.6□□□□□ -1.51
HOXC12P31275 AC073544.1-201ENST00000600110 1595 ntBASIC5.6□□□□□ -1.51
HOXC12P31275 MTCO1P11-201ENST00000429111 1528 ntBASIC5.6□□□□□ -1.51
HOXC12P31275 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC12P31275 AP002001.2-201ENST00000529025 1469 ntBASIC5.6□□□□□ -1.51
HOXC12P31275 AC093671.1-201ENST00000624981 2929 ntBASIC5.6□□□□□ -1.51
HOXC12P31275 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC12P31275 RNU6-984P-201ENST00000363236 109 ntBASIC5.6□□□□□ -1.51
HOXC12P31275 RNU6-289P-201ENST00000364093 107 ntBASIC5.6□□□□□ -1.51
HOXC12P31275 RNU6-777P-201ENST00000364265 104 ntBASIC5.6□□□□□ -1.51
HOXC12P31275 Y_RNA.296-201ENST00000364930 108 ntBASIC5.6□□□□□ -1.51
HOXC12P31275 Y_RNA.303-201ENST00000364998 94 ntBASIC5.6□□□□□ -1.51
HOXC12P31275 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXC12P31275 RPS3AP36-201ENST00000398190 775 ntBASIC5.6□□□□□ -1.51
HOXC12P31275 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.6□□□□□ -1.51
HOXC12P31275 AL139805.1-201ENST00000407837 289 ntBASIC5.6□□□□□ -1.51
HOXC12P31275 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.6□□□□□ -1.51
HOXC12P31275 C1DP2-201ENST00000418167 426 ntBASIC5.6□□□□□ -1.51
HOXC12P31275 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXC12P31275 CYCSP52-201ENST00000422857 310 ntBASIC5.6□□□□□ -1.51
HOXC12P31275 AC233728.2-201ENST00000425348 757 ntBASIC5.6□□□□□ -1.51
HOXC12P31275 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC12P31275 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXC12P31275 PNKDP1-201ENST00000435914 430 ntBASIC5.6□□□□□ -1.51
HOXC12P31275 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXC12P31275 AL591623.2-201ENST00000449978 222 ntBASIC5.6□□□□□ -1.51
HOXC12P31275 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXC12P31275 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXC12P31275 ACTR3P3-201ENST00000480448 893 ntBASIC5.6□□□□□ -1.51
HOXC12P31275 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXC12P31275 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXC12P31275 ARL2BPP6-201ENST00000512757 439 ntBASIC5.6□□□□□ -1.51
HOXC12P31275 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms