Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AC005008.1-201ENST00000456151 612 ntBASIC4.46□□□□□ -1.7
HOXA9P31269 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HOXA9P31269 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXA9P31269 RPL23AP65-201ENST00000475608 468 ntBASIC4.46□□□□□ -1.7
HOXA9P31269 AC108022.1-201ENST00000493466 478 ntBASIC4.46□□□□□ -1.7
HOXA9P31269 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXA9P31269 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXA9P31269 RPL21P7-201ENST00000557463 483 ntBASIC4.46□□□□□ -1.7
HOXA9P31269 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXA9P31269 MTND2P13-201ENST00000577438 1039 ntBASIC4.46□□□□□ -1.7
HOXA9P31269 Z98200.1-201ENST00000607298 470 ntBASIC4.46□□□□□ -1.7
HOXA9P31269 MIR92B-201ENST00000607575 96 ntBASIC4.46□□□□□ -1.7
HOXA9P31269 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXA9P31269 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HOXA9P31269 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXA9P31269 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
HOXA9P31269 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
HOXA9P31269 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXA9P31269 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXA9P31269 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HOXA9P31269 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HOXA9P31269 AL122126.1-201ENST00000546905 1318 ntBASIC4.46□□□□□ -1.7
HOXA9P31269 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
HOXA9P31269 RLIMP1-201ENST00000339626 1680 ntBASIC4.45□□□□□ -1.7
HOXA9P31269 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXA9P31269 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
HOXA9P31269 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXA9P31269 AC011155.1-201ENST00000316512 456 ntBASIC4.45□□□□□ -1.7
HOXA9P31269 AL359837.1-201ENST00000381357 287 ntBASIC4.45□□□□□ -1.7
HOXA9P31269 RPS24P12-201ENST00000402084 394 ntBASIC4.45□□□□□ -1.7
HOXA9P31269 AL078604.1-201ENST00000404609 466 ntBASIC4.45□□□□□ -1.7
HOXA9P31269 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXA9P31269 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXA9P31269 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.45□□□□□ -1.7
HOXA9P31269 RPS26P47-201ENST00000427219 348 ntBASIC4.45□□□□□ -1.7
HOXA9P31269 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.45□□□□□ -1.7
HOXA9P31269 AL162388.1-201ENST00000450912 352 ntBASIC4.45□□□□□ -1.7
HOXA9P31269 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXA9P31269 AC022795.1-201ENST00000473808 480 ntBASIC4.45□□□□□ -1.7
HOXA9P31269 VN1R105P-201ENST00000486595 910 ntBASIC4.45□□□□□ -1.7
HOXA9P31269 RN7SL604P-201ENST00000492589 296 ntBASIC4.45□□□□□ -1.7
HOXA9P31269 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXA9P31269 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXA9P31269 MTCYBP19-201ENST00000517463 1124 ntBASIC4.45□□□□□ -1.7
HOXA9P31269 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.45□□□□□ -1.7
HOXA9P31269 AC006064.5-201ENST00000541782 248 ntBASIC4.45□□□□□ -1.7
HOXA9P31269 GLRXP2-201ENST00000555594 321 ntBASIC4.45□□□□□ -1.7
HOXA9P31269 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HOXA9P31269 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXA9P31269 AL160290.3-201ENST00000604869 165 ntBASIC4.45□□□□□ -1.7
HOXA9P31269 AC096586.2-201ENST00000610260 441 ntBASIC4.45□□□□□ -1.7
HOXA9P31269 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HOXA9P31269 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXA9P31269 OR8B1P-202ENST00000641132 1178 ntBASIC4.45□□□□□ -1.7
HOXA9P31269 AL596275.2-204ENST00000641628 552 ntBASIC4.45□□□□□ -1.7
HOXA9P31269 AL596275.2-206ENST00000641957 626 ntBASIC4.45□□□□□ -1.7
HOXA9P31269 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HOXA9P31269 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXA9P31269 LINC01109-201ENST00000603837 3081 ntBASIC4.45□□□□□ -1.7
HOXA9P31269 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXA9P31269 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXA9P31269 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
HOXA9P31269 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXA9P31269 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXA9P31269 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
HOXA9P31269 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HOXA9P31269 OR10J6P-201ENST00000289731 930 ntBASIC4.44□□□□□ -1.7
HOXA9P31269 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXA9P31269 MIR365B-201ENST00000362317 111 ntBASIC4.44□□□□□ -1.7
HOXA9P31269 MIR554-201ENST00000384874 96 ntBASIC4.44□□□□□ -1.7
HOXA9P31269 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXA9P31269 HSPD1P16-201ENST00000402302 394 ntBASIC4.44□□□□□ -1.7
HOXA9P31269 AC098592.2-201ENST00000413158 265 ntBASIC4.44□□□□□ -1.7
HOXA9P31269 VN1R31P-201ENST00000417498 730 ntBASIC4.44□□□□□ -1.7
HOXA9P31269 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXA9P31269 AC004448.2-201ENST00000422360 586 ntBASIC4.44□□□□□ -1.7
HOXA9P31269 AL389915.1-201ENST00000422463 466 ntBASIC4.44□□□□□ -1.7
HOXA9P31269 OR8F1P-201ENST00000425243 930 ntBASIC4.44□□□□□ -1.7
HOXA9P31269 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXA9P31269 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.44□□□□□ -1.7
HOXA9P31269 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXA9P31269 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXA9P31269 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXA9P31269 AC091959.2-201ENST00000477363 321 ntBASIC4.44□□□□□ -1.7
HOXA9P31269 RN7SL132P-201ENST00000478131 296 ntBASIC4.44□□□□□ -1.7
HOXA9P31269 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HOXA9P31269 IFITM8P-201ENST00000522529 394 ntBASIC4.44□□□□□ -1.7
HOXA9P31269 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HOXA9P31269 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXA9P31269 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXA9P31269 AC068446.3-201ENST00000555285 382 ntBASIC4.44□□□□□ -1.7
HOXA9P31269 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXA9P31269 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXA9P31269 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXA9P31269 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.44□□□□□ -1.7
HOXA9P31269 AC004241.3-201ENST00000611728 517 ntBASIC4.44□□□□□ -1.7
HOXA9P31269 MIR6875-201ENST00000617506 72 ntBASIC4.44□□□□□ -1.7
HOXA9P31269 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXA9P31269 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
HOXA9P31269 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms