Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
MMP3P08254 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
MMP3P08254 TTC39DP-201ENST00000416781 1688 ntBASIC5.09□□□□□ -1.59
MMP3P08254 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
MMP3P08254 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
MMP3P08254 AC092376.2-201ENST00000622621 4116 ntBASIC5.09□□□□□ -1.59
MMP3P08254 AC104623.2-202ENST00000623477 4002 ntBASIC5.09□□□□□ -1.59
MMP3P08254 MFSD8-213ENST00000641134 1327 ntBASIC5.09□□□□□ -1.59
MMP3P08254 RNU6-1263P-201ENST00000384601 106 ntBASIC5.09□□□□□ -1.59
MMP3P08254 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
MMP3P08254 AC093084.1-201ENST00000424233 687 ntBASIC5.09□□□□□ -1.59
MMP3P08254 RPS12P10-201ENST00000427031 377 ntBASIC5.09□□□□□ -1.59
MMP3P08254 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC5.09□□□□□ -1.59
MMP3P08254 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
MMP3P08254 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.09□□□□□ -1.59
MMP3P08254 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.09□□□□□ -1.59
MMP3P08254 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
MMP3P08254 RPL6P5-201ENST00000445678 828 ntBASIC5.09□□□□□ -1.59
MMP3P08254 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.09□□□□□ -1.59
MMP3P08254 AC239367.2-201ENST00000447309 705 ntBASIC5.09□□□□□ -1.59
MMP3P08254 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.09□□□□□ -1.59
MMP3P08254 ISCUP1-201ENST00000454451 448 ntBASIC5.09□□□□□ -1.59
MMP3P08254 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
MMP3P08254 AC090686.1-201ENST00000481577 749 ntBASIC5.09□□□□□ -1.59
MMP3P08254 RPS27AP16-201ENST00000492222 470 ntBASIC5.09□□□□□ -1.59
MMP3P08254 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
MMP3P08254 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.09□□□□□ -1.59
MMP3P08254 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.09□□□□□ -1.59
MMP3P08254 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.09□□□□□ -1.59
MMP3P08254 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.09□□□□□ -1.59
MMP3P08254 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.09□□□□□ -1.59
MMP3P08254 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.09□□□□□ -1.59
MMP3P08254 NPM1P6-201ENST00000521088 871 ntBASIC5.09□□□□□ -1.59
MMP3P08254 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
MMP3P08254 AP000859.1-201ENST00000525536 307 ntBASIC5.09□□□□□ -1.59
MMP3P08254 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.09□□□□□ -1.59
MMP3P08254 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.09□□□□□ -1.59
MMP3P08254 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.09□□□□□ -1.59
MMP3P08254 MIR3160-1-201ENST00000577972 85 ntBASIC5.09□□□□□ -1.59
MMP3P08254 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.09□□□□□ -1.59
MMP3P08254 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.09□□□□□ -1.59
MMP3P08254 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.09□□□□□ -1.59
MMP3P08254 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.09□□□□□ -1.59
MMP3P08254 AL357094.1-201ENST00000603845 844 ntBASIC5.09□□□□□ -1.59
MMP3P08254 AC019131.2-201ENST00000609071 870 ntBASIC5.09□□□□□ -1.59
MMP3P08254 AC015804.1-201ENST00000622935 435 ntBASIC5.09□□□□□ -1.59
MMP3P08254 AP000843.1-201ENST00000624880 701 ntBASIC5.09□□□□□ -1.59
MMP3P08254 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.09□□□□□ -1.59
MMP3P08254 AC007342.7-201ENST00000624610 2337 ntBASIC5.09□□□□□ -1.59
MMP3P08254 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
MMP3P08254 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
MMP3P08254 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
MMP3P08254 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.6
MMP3P08254 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
MMP3P08254 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
MMP3P08254 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.09□□□□□ -1.6
MMP3P08254 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
MMP3P08254 SAMMSON-213ENST00000641336 1521 ntBASIC5.08□□□□□ -1.6
MMP3P08254 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.08□□□□□ -1.6
MMP3P08254 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
MMP3P08254 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
MMP3P08254 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
MMP3P08254 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
MMP3P08254 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
MMP3P08254 SNORD56.4-201ENST00000363883 71 ntBASIC5.08□□□□□ -1.6
MMP3P08254 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
MMP3P08254 AP002784.2-201ENST00000397300 549 ntBASIC5.08□□□□□ -1.6
MMP3P08254 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.08□□□□□ -1.6
MMP3P08254 RNU4-74P-201ENST00000411280 161 ntBASIC5.08□□□□□ -1.6
MMP3P08254 SSR1P2-201ENST00000415208 787 ntBASIC5.08□□□□□ -1.6
MMP3P08254 OR51A6P-201ENST00000418680 1004 ntBASIC5.08□□□□□ -1.6
MMP3P08254 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.08□□□□□ -1.6
MMP3P08254 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.08□□□□□ -1.6
MMP3P08254 AC011998.1-201ENST00000433403 117 ntBASIC5.08□□□□□ -1.6
MMP3P08254 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.08□□□□□ -1.6
MMP3P08254 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.08□□□□□ -1.6
MMP3P08254 BTF3P6-201ENST00000448054 499 ntBASIC5.08□□□□□ -1.6
MMP3P08254 AL935212.3-201ENST00000450729 284 ntBASIC5.08□□□□□ -1.6
MMP3P08254 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.08□□□□□ -1.6
MMP3P08254 RN7SL98P-201ENST00000462271 300 ntBASIC5.08□□□□□ -1.6
MMP3P08254 TPT1P3-201ENST00000492841 512 ntBASIC5.08□□□□□ -1.6
MMP3P08254 AC025459.1-201ENST00000504072 156 ntBASIC5.08□□□□□ -1.6
MMP3P08254 AC098862.1-201ENST00000504991 413 ntBASIC5.08□□□□□ -1.6
MMP3P08254 AC026402.1-201ENST00000513642 170 ntBASIC5.08□□□□□ -1.6
MMP3P08254 SNORA31.13-201ENST00000516624 135 ntBASIC5.08□□□□□ -1.6
MMP3P08254 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.08□□□□□ -1.6
MMP3P08254 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.08□□□□□ -1.6
MMP3P08254 AC087888.1-201ENST00000550884 1254 ntBASIC5.08□□□□□ -1.6
MMP3P08254 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.08□□□□□ -1.6
MMP3P08254 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.08□□□□□ -1.6
MMP3P08254 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.08□□□□□ -1.6
MMP3P08254 AC006272.2-201ENST00000594725 163 ntBASIC5.08□□□□□ -1.6
MMP3P08254 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.08□□□□□ -1.6
MMP3P08254 ARF4P1-201ENST00000605447 541 ntBASIC5.08□□□□□ -1.6
MMP3P08254 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
MMP3P08254 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
MMP3P08254 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.08□□□□□ -1.6
MMP3P08254 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
MMP3P08254 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
MMP3P08254 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms