Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
HLA-DPB1P04440 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DPB1P04440 AC008033.1-201ENST00000216407 1162 ntBASIC3.77□□□□□ -1.81
HLA-DPB1P04440 IGKV7-3-201ENST00000357453 298 ntBASIC3.77□□□□□ -1.81
HLA-DPB1P04440 RNU4-7P-201ENST00000364758 141 ntBASIC3.77□□□□□ -1.81
HLA-DPB1P04440 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HLA-DPB1P04440 RNU1-89P-201ENST00000384592 164 ntBASIC3.77□□□□□ -1.81
HLA-DPB1P04440 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HLA-DPB1P04440 ATP5F1P2-201ENST00000398143 760 ntBASIC3.77□□□□□ -1.81
HLA-DPB1P04440 AL136131.1-201ENST00000406079 803 ntBASIC3.77□□□□□ -1.81
HLA-DPB1P04440 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.77□□□□□ -1.81
HLA-DPB1P04440 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DPB1P04440 AL356806.1-201ENST00000422524 916 ntBASIC3.77□□□□□ -1.81
HLA-DPB1P04440 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.77□□□□□ -1.81
HLA-DPB1P04440 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.77□□□□□ -1.81
HLA-DPB1P04440 CEACAMP1-201ENST00000434624 1035 ntBASIC3.77□□□□□ -1.81
HLA-DPB1P04440 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.77□□□□□ -1.81
HLA-DPB1P04440 AL606490.8-201ENST00000441624 319 ntBASIC3.77□□□□□ -1.81
HLA-DPB1P04440 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.77□□□□□ -1.81
HLA-DPB1P04440 CEACAMP9-201ENST00000442990 513 ntBASIC3.77□□□□□ -1.81
HLA-DPB1P04440 YWHAQP9-201ENST00000445891 512 ntBASIC3.77□□□□□ -1.81
HLA-DPB1P04440 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.77□□□□□ -1.81
HLA-DPB1P04440 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DPB1P04440 BUD31P2-201ENST00000449374 300 ntBASIC3.77□□□□□ -1.81
HLA-DPB1P04440 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.77□□□□□ -1.81
HLA-DPB1P04440 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.77□□□□□ -1.81
HLA-DPB1P04440 snoU13.1-201ENST00000459157 104 ntBASIC3.77□□□□□ -1.81
HLA-DPB1P04440 EIF2S2P4-201ENST00000461070 984 ntBASIC3.77□□□□□ -1.81
HLA-DPB1P04440 STRADBP1-201ENST00000478954 1281 ntBASIC3.77□□□□□ -1.81
HLA-DPB1P04440 AC013356.1-201ENST00000489027 564 ntBASIC3.77□□□□□ -1.81
HLA-DPB1P04440 AC146944.2-203ENST00000502493 354 ntBASIC3.77□□□□□ -1.81
HLA-DPB1P04440 AC139495.1-202ENST00000513164 354 ntBASIC3.77□□□□□ -1.81
HLA-DPB1P04440 RNA5SP228-201ENST00000516232 133 ntBASIC3.77□□□□□ -1.81
HLA-DPB1P04440 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.77□□□□□ -1.81
HLA-DPB1P04440 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.77□□□□□ -1.81
HLA-DPB1P04440 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.77□□□□□ -1.81
HLA-DPB1P04440 AP000827.1-201ENST00000527814 258 ntBASIC3.77□□□□□ -1.81
HLA-DPB1P04440 CR383656.6-201ENST00000550518 394 ntBASIC3.77□□□□□ -1.81
HLA-DPB1P04440 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.77□□□□□ -1.81
HLA-DPB1P04440 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.77□□□□□ -1.81
HLA-DPB1P04440 MIR4715-201ENST00000584117 79 ntBASIC3.77□□□□□ -1.81
HLA-DPB1P04440 AC079587.1-201ENST00000603846 277 ntBASIC3.77□□□□□ -1.81
HLA-DPB1P04440 HMGB1P51-201ENST00000605166 638 ntBASIC3.77□□□□□ -1.81
HLA-DPB1P04440 AL021997.2-201ENST00000615674 271 ntBASIC3.77□□□□□ -1.81
HLA-DPB1P04440 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.77□□□□□ -1.81
HLA-DPB1P04440 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.77□□□□□ -1.81
HLA-DPB1P04440 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DPB1P04440 AC027287.1-201ENST00000553115 1453 ntBASIC3.77□□□□□ -1.81
HLA-DPB1P04440 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.77□□□□□ -1.81
HLA-DPB1P04440 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.77□□□□□ -1.81
HLA-DPB1P04440 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DPB1P04440 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DPB1P04440 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.77□□□□□ -1.81
HLA-DPB1P04440 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DPB1P04440 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.77□□□□□ -1.81
HLA-DPB1P04440 OR56B2P-202ENST00000641377 2453 ntBASIC3.77□□□□□ -1.81
HLA-DPB1P04440 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
HLA-DPB1P04440 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.76□□□□□ -1.81
HLA-DPB1P04440 BDP1P-201ENST00000582658 1990 ntBASIC3.76□□□□□ -1.81
HLA-DPB1P04440 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DPB1P04440 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DPB1P04440 AC010300.1-201ENST00000600671 5134 ntBASIC3.76□□□□□ -1.81
HLA-DPB1P04440 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DPB1P04440 AC093775.1-201ENST00000624154 1868 ntBASIC3.76□□□□□ -1.81
HLA-DPB1P04440 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DPB1P04440 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.76□□□□□ -1.81
HLA-DPB1P04440 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.76□□□□□ -1.81
HLA-DPB1P04440 RNA5SP322-201ENST00000363617 119 ntBASIC3.76□□□□□ -1.81
HLA-DPB1P04440 RNU6-819P-201ENST00000364116 107 ntBASIC3.76□□□□□ -1.81
HLA-DPB1P04440 RNA5SP175-201ENST00000364275 119 ntBASIC3.76□□□□□ -1.81
HLA-DPB1P04440 RPL23AP59-201ENST00000399415 461 ntBASIC3.76□□□□□ -1.81
HLA-DPB1P04440 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.76□□□□□ -1.81
HLA-DPB1P04440 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DPB1P04440 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DPB1P04440 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DPB1P04440 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC3.76□□□□□ -1.81
HLA-DPB1P04440 USP12PY-201ENST00000427677 1064 ntBASIC3.76□□□□□ -1.81
HLA-DPB1P04440 RPL23AP4-201ENST00000427757 463 ntBASIC3.76□□□□□ -1.81
HLA-DPB1P04440 CNOT7P1-201ENST00000429006 852 ntBASIC3.76□□□□□ -1.81
HLA-DPB1P04440 AC022022.1-201ENST00000430304 178 ntBASIC3.76□□□□□ -1.81
HLA-DPB1P04440 RPL12P28-201ENST00000430852 489 ntBASIC3.76□□□□□ -1.81
HLA-DPB1P04440 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.76□□□□□ -1.81
HLA-DPB1P04440 ATP5HP2-201ENST00000433885 485 ntBASIC3.76□□□□□ -1.81
HLA-DPB1P04440 AF228730.2-201ENST00000438784 848 ntBASIC3.76□□□□□ -1.81
HLA-DPB1P04440 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DPB1P04440 NPM1P39-201ENST00000449818 867 ntBASIC3.76□□□□□ -1.81
HLA-DPB1P04440 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.76□□□□□ -1.81
HLA-DPB1P04440 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.76□□□□□ -1.81
HLA-DPB1P04440 AC096741.1-201ENST00000472250 846 ntBASIC3.76□□□□□ -1.81
HLA-DPB1P04440 AC063950.1-201ENST00000552036 308 ntBASIC3.76□□□□□ -1.81
HLA-DPB1P04440 MTATP6P25-201ENST00000574491 261 ntBASIC3.76□□□□□ -1.81
HLA-DPB1P04440 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.76□□□□□ -1.81
HLA-DPB1P04440 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
HLA-DPB1P04440 AC104785.1-201ENST00000603220 588 ntBASIC3.76□□□□□ -1.81
HLA-DPB1P04440 AC008745.1-201ENST00000604064 271 ntBASIC3.76□□□□□ -1.81
HLA-DPB1P04440 AC019131.2-201ENST00000609071 870 ntBASIC3.76□□□□□ -1.81
HLA-DPB1P04440 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
HLA-DPB1P04440 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.76□□□□□ -1.81
HLA-DPB1P04440 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.76□□□□□ -1.81
HLA-DPB1P04440 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms