Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.42□□□□□ -2.02
APOBP04114 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC2.42□□□□□ -2.02
APOBP04114 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC2.42□□□□□ -2.02
APOBP04114 MIR5680-201ENST00000577577 84 ntBASIC2.42□□□□□ -2.02
APOBP04114 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.42□□□□□ -2.02
APOBP04114 AC091905.2-201ENST00000623143 306 ntBASIC2.42□□□□□ -2.02
APOBP04114 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.42□□□□□ -2.02
APOBP04114 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC2.42□□□□□ -2.02
APOBP04114 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
APOBP04114 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC2.42□□□□□ -2.02
APOBP04114 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
APOBP04114 SNORD96B-201ENST00000386148 79 ntBASIC2.42□□□□□ -2.02
APOBP04114 OSTCP5-201ENST00000425293 453 ntBASIC2.42□□□□□ -2.02
APOBP04114 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC2.42□□□□□ -2.02
APOBP04114 RN7SL271P-201ENST00000487601 295 ntBASIC2.42□□□□□ -2.02
APOBP04114 AC118465.1-201ENST00000513820 1271 ntBASIC2.42□□□□□ -2.02
APOBP04114 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC2.42□□□□□ -2.02
APOBP04114 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC2.42□□□□□ -2.02
APOBP04114 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
APOBP04114 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
APOBP04114 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC2.42□□□□□ -2.02
APOBP04114 SNORA60-201ENST00000362396 134 ntBASIC2.42□□□□□ -2.02
APOBP04114 XGY1-201ENST00000381172 446 ntBASIC2.42□□□□□ -2.02
APOBP04114 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
APOBP04114 AL121878.1-201ENST00000418638 859 ntBASIC2.42□□□□□ -2.02
APOBP04114 AC009506.2-201ENST00000420635 840 ntBASIC2.42□□□□□ -2.02
APOBP04114 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC2.42□□□□□ -2.02
APOBP04114 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC2.42□□□□□ -2.02
APOBP04114 AC127537.2-201ENST00000439258 465 ntBASIC2.42□□□□□ -2.02
APOBP04114 RPS27AP1-201ENST00000475545 471 ntBASIC2.42□□□□□ -2.02
APOBP04114 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
APOBP04114 MIR7106-201ENST00000612419 65 ntBASIC2.42□□□□□ -2.02
APOBP04114 MIR8058-201ENST00000615737 89 ntBASIC2.42□□□□□ -2.02
APOBP04114 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC2.42□□□□□ -2.02
APOBP04114 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
APOBP04114 AC007529.1-201ENST00000418574 2178 ntBASIC2.41□□□□□ -2.02
APOBP04114 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
APOBP04114 AC007823.1-201ENST00000569932 1566 ntBASIC2.41□□□□□ -2.02
APOBP04114 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
APOBP04114 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC2.41□□□□□ -2.02
APOBP04114 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
APOBP04114 ANKRD36P1-201ENST00000344424 659 ntBASIC2.41□□□□□ -2.02
APOBP04114 RPL7P60-201ENST00000397636 735 ntBASIC2.41□□□□□ -2.02
APOBP04114 AC022695.1-201ENST00000522089 237 ntBASIC2.41□□□□□ -2.02
APOBP04114 NELL2-211ENST00000548826 559 ntTSL 2 BASIC2.41□□□□□ -2.02
APOBP04114 AC013412.1-201ENST00000610687 192 ntBASIC2.41□□□□□ -2.02
APOBP04114 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC2.41□□□□□ -2.02
APOBP04114 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC2.41□□□□□ -2.02
APOBP04114 AC003985.2-201ENST00000562268 1669 ntBASIC2.41□□□□□ -2.02
APOBP04114 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
APOBP04114 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
APOBP04114 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
APOBP04114 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
APOBP04114 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
APOBP04114 RNA5SP399-201ENST00000364003 117 ntBASIC2.41□□□□□ -2.02
APOBP04114 PEX12P1-201ENST00000400284 1048 ntBASIC2.41□□□□□ -2.02
APOBP04114 AC004448.2-201ENST00000422360 586 ntBASIC2.41□□□□□ -2.02
APOBP04114 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC2.41□□□□□ -2.02
APOBP04114 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.41□□□□□ -2.02
APOBP04114 AC025627.2-201ENST00000576220 160 ntBASIC2.41□□□□□ -2.02
APOBP04114 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC2.41□□□□□ -2.02
APOBP04114 AC234782.5-201ENST00000617723 324 ntBASIC2.41□□□□□ -2.02
APOBP04114 AC019278.1-201ENST00000623516 479 ntBASIC2.41□□□□□ -2.02
APOBP04114 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.41□□□□□ -2.02
APOBP04114 AL022393.1-201ENST00000625142 1677 ntBASIC2.41□□□□□ -2.02
APOBP04114 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
APOBP04114 LINC00561-201ENST00000565815 2738 ntBASIC2.41□□□□□ -2.02
APOBP04114 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
APOBP04114 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
APOBP04114 OSBPL9P1-201ENST00000604744 1469 ntBASIC2.41□□□□□ -2.02
APOBP04114 SNORD35B-201ENST00000363660 87 ntBASIC2.41□□□□□ -2.02
APOBP04114 RNU6-301P-201ENST00000384277 107 ntBASIC2.41□□□□□ -2.02
APOBP04114 RANP8-201ENST00000444720 713 ntBASIC2.41□□□□□ -2.02
APOBP04114 SUN3-208ENST00000453192 801 ntTSL 5 BASIC2.41□□□□□ -2.02
APOBP04114 AC108751.2-201ENST00000469993 231 ntBASIC2.41□□□□□ -2.02
APOBP04114 RN7SL807P-201ENST00000470923 297 ntBASIC2.41□□□□□ -2.02
APOBP04114 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC2.41□□□□□ -2.02
APOBP04114 RPL21P13-201ENST00000488305 481 ntBASIC2.41□□□□□ -2.02
APOBP04114 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC2.41□□□□□ -2.02
APOBP04114 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC2.41□□□□□ -2.02
APOBP04114 AC005476.1-201ENST00000554427 397 ntBASIC2.41□□□□□ -2.02
APOBP04114 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC2.41□□□□□ -2.02
APOBP04114 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
APOBP04114 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
APOBP04114 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC2.41□□□□□ -2.02
APOBP04114 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC2.41□□□□□ -2.02
APOBP04114 AL133268.1-201ENST00000405676 1401 ntBASIC2.41□□□□□ -2.02
APOBP04114 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC2.41□□□□□ -2.02
APOBP04114 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC2.41□□□□□ -2.02
APOBP04114 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
APOBP04114 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
APOBP04114 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
APOBP04114 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
APOBP04114 SNORA80A-201ENST00000363922 136 ntBASIC2.41□□□□□ -2.02
APOBP04114 RNU1-44P-201ENST00000384453 163 ntBASIC2.41□□□□□ -2.02
APOBP04114 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC2.41□□□□□ -2.02
APOBP04114 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.41□□□□□ -2.02
APOBP04114 AC008694.2-201ENST00000517591 306 ntBASIC2.41□□□□□ -2.02
APOBP04114 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
APOBP04114 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms