Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SPTA1P02549 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SPTA1P02549 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.76□□□□□ -1.81
SPTA1P02549 RNA5SP126-201ENST00000365092 109 ntBASIC3.75□□□□□ -1.81
SPTA1P02549 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SPTA1P02549 AP004289.2-201ENST00000444413 1457 ntBASIC3.75□□□□□ -1.81
SPTA1P02549 ENSA-211ENST00000503345 793 ntTSL 3 BASIC3.75□□□□□ -1.81
SPTA1P02549 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.75□□□□□ -1.81
SPTA1P02549 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.75□□□□□ -1.81
SPTA1P02549 YPEL5P3-201ENST00000547227 352 ntBASIC3.75□□□□□ -1.81
SPTA1P02549 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SPTA1P02549 AL354984.3-201ENST00000604803 325 ntBASIC3.75□□□□□ -1.81
SPTA1P02549 AL049634.3-201ENST00000604968 457 ntBASIC3.75□□□□□ -1.81
SPTA1P02549 AL137918.1-201ENST00000624542 1922 ntBASIC3.75□□□□□ -1.81
SPTA1P02549 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SPTA1P02549 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SPTA1P02549 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SPTA1P02549 AL442128.2-201ENST00000620246 1824 ntBASIC3.75□□□□□ -1.81
SPTA1P02549 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
SPTA1P02549 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.75□□□□□ -1.81
SPTA1P02549 ENSAP1-201ENST00000392855 326 ntBASIC3.75□□□□□ -1.81
SPTA1P02549 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.75□□□□□ -1.81
SPTA1P02549 RPS7P15-201ENST00000415804 584 ntBASIC3.75□□□□□ -1.81
SPTA1P02549 RPL7P4-203ENST00000430239 730 ntBASIC3.75□□□□□ -1.81
SPTA1P02549 AL159987.2-201ENST00000432754 307 ntBASIC3.75□□□□□ -1.81
SPTA1P02549 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.75□□□□□ -1.81
SPTA1P02549 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC3.75□□□□□ -1.81
SPTA1P02549 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.75□□□□□ -1.81
SPTA1P02549 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.75□□□□□ -1.81
SPTA1P02549 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
SPTA1P02549 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
SPTA1P02549 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SPTA1P02549 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
SPTA1P02549 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC3.75□□□□□ -1.81
SPTA1P02549 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
SPTA1P02549 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SPTA1P02549 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.74□□□□□ -1.81
SPTA1P02549 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SPTA1P02549 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SPTA1P02549 EIF1P3-201ENST00000423841 334 ntBASIC3.74□□□□□ -1.81
SPTA1P02549 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.74□□□□□ -1.81
SPTA1P02549 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC3.74□□□□□ -1.81
SPTA1P02549 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
SPTA1P02549 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
SPTA1P02549 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
SPTA1P02549 MAPK10-303ENST00000641324 3959 ntBASIC3.74□□□□□ -1.81
SPTA1P02549 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SPTA1P02549 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SPTA1P02549 MTCO1P46-201ENST00000451639 1491 ntBASIC3.74□□□□□ -1.81
SPTA1P02549 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SPTA1P02549 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SPTA1P02549 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SPTA1P02549 RPL23AP57-201ENST00000332361 466 ntBASIC3.74□□□□□ -1.81
SPTA1P02549 SNORA38.1-201ENST00000364172 131 ntBASIC3.74□□□□□ -1.81
SPTA1P02549 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SPTA1P02549 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC3.74□□□□□ -1.81
SPTA1P02549 AL691449.1-201ENST00000426570 421 ntBASIC3.74□□□□□ -1.81
SPTA1P02549 DDX39BP2-208ENST00000453923 258 ntBASIC3.74□□□□□ -1.81
SPTA1P02549 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC3.74□□□□□ -1.81
SPTA1P02549 AC012158.1-204ENST00000483430 465 ntBASIC3.74□□□□□ -1.81
SPTA1P02549 AC108145.1-201ENST00000503770 153 ntBASIC3.74□□□□□ -1.81
SPTA1P02549 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.74□□□□□ -1.81
SPTA1P02549 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.74□□□□□ -1.81
SPTA1P02549 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.74□□□□□ -1.81
SPTA1P02549 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SPTA1P02549 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SPTA1P02549 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
SPTA1P02549 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
SPTA1P02549 RNU1-63P-201ENST00000383902 164 ntBASIC3.73□□□□□ -1.81
SPTA1P02549 RPL23AP46-201ENST00000438548 490 ntBASIC3.73□□□□□ -1.81
SPTA1P02549 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.73□□□□□ -1.81
SPTA1P02549 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.73□□□□□ -1.81
SPTA1P02549 RN7SL807P-201ENST00000470923 297 ntBASIC3.73□□□□□ -1.81
SPTA1P02549 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.73□□□□□ -1.81
SPTA1P02549 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.73□□□□□ -1.81
SPTA1P02549 RNU6-352P-201ENST00000516908 107 ntBASIC3.73□□□□□ -1.81
SPTA1P02549 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.73□□□□□ -1.81
SPTA1P02549 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.73□□□□□ -1.81
SPTA1P02549 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.73□□□□□ -1.81
SPTA1P02549 U3.45-201ENST00000607547 219 ntBASIC3.73□□□□□ -1.81
SPTA1P02549 AP000473.2-201ENST00000602659 1537 ntBASIC3.73□□□□□ -1.81
SPTA1P02549 PRO1804-201ENST00000623780 2050 ntBASIC3.73□□□□□ -1.81
SPTA1P02549 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.73□□□□□ -1.81
SPTA1P02549 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SPTA1P02549 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC3.73□□□□□ -1.81
SPTA1P02549 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC3.73□□□□□ -1.81
SPTA1P02549 SNORA57.3-201ENST00000411095 141 ntBASIC3.73□□□□□ -1.81
SPTA1P02549 HNRNPA1P29-201ENST00000426409 879 ntBASIC3.73□□□□□ -1.81
SPTA1P02549 HSPD1P21-201ENST00000436541 245 ntBASIC3.73□□□□□ -1.81
SPTA1P02549 RN7SL601P-201ENST00000471221 293 ntBASIC3.73□□□□□ -1.81
SPTA1P02549 RPL23AP37-201ENST00000479658 549 ntBASIC3.73□□□□□ -1.81
SPTA1P02549 RN7SL809P-201ENST00000482040 297 ntBASIC3.73□□□□□ -1.81
SPTA1P02549 AF213884.1-201ENST00000488102 463 ntBASIC3.73□□□□□ -1.81
SPTA1P02549 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.73□□□□□ -1.81
SPTA1P02549 AC005868.1-201ENST00000536421 331 ntBASIC3.73□□□□□ -1.81
SPTA1P02549 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.73□□□□□ -1.81
SPTA1P02549 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
SPTA1P02549 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
SPTA1P02549 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.73□□□□□ -1.81
SPTA1P02549 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms