Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.86□□□□□ -1.63
COL1A1P02452 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.86□□□□□ -1.63
COL1A1P02452 AC090246.1-201ENST00000616499 426 ntBASIC4.86□□□□□ -1.63
COL1A1P02452 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.86□□□□□ -1.63
COL1A1P02452 AC063952.1-203ENST00000634410 658 ntBASIC4.86□□□□□ -1.63
COL1A1P02452 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.86□□□□□ -1.63
COL1A1P02452 AC009093.8-201ENST00000641769 292 ntBASIC4.86□□□□□ -1.63
COL1A1P02452 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL1A1P02452 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.86□□□□□ -1.63
COL1A1P02452 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
COL1A1P02452 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL1A1P02452 Z95327.2-201ENST00000414579 1873 ntBASIC4.86□□□□□ -1.63
COL1A1P02452 MAPK10-303ENST00000641324 3959 ntBASIC4.85□□□□□ -1.63
COL1A1P02452 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL1A1P02452 AC021242.1-201ENST00000507315 2035 ntBASIC4.85□□□□□ -1.63
COL1A1P02452 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
COL1A1P02452 RAB9AP3-201ENST00000412737 573 ntBASIC4.85□□□□□ -1.63
COL1A1P02452 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.85□□□□□ -1.63
COL1A1P02452 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.85□□□□□ -1.63
COL1A1P02452 RAB9AP1-201ENST00000449393 573 ntBASIC4.85□□□□□ -1.63
COL1A1P02452 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.85□□□□□ -1.63
COL1A1P02452 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.85□□□□□ -1.63
COL1A1P02452 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.85□□□□□ -1.63
COL1A1P02452 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.85□□□□□ -1.63
COL1A1P02452 AF131215.7-201ENST00000602443 707 ntBASIC4.85□□□□□ -1.63
COL1A1P02452 OR7M1P-201ENST00000608946 533 ntBASIC4.85□□□□□ -1.63
COL1A1P02452 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.85□□□□□ -1.63
COL1A1P02452 AC015922.4-201ENST00000612568 690 ntBASIC4.85□□□□□ -1.63
COL1A1P02452 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL1A1P02452 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL1A1P02452 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL1A1P02452 LINC00561-201ENST00000565815 2738 ntBASIC4.85□□□□□ -1.63
COL1A1P02452 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL1A1P02452 MARK2P15-201ENST00000432204 2186 ntBASIC4.84□□□□□ -1.63
COL1A1P02452 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL1A1P02452 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL1A1P02452 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL1A1P02452 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL1A1P02452 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL1A1P02452 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.84□□□□□ -1.63
COL1A1P02452 SNORA73.2-201ENST00000364946 201 ntBASIC4.84□□□□□ -1.63
COL1A1P02452 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.84□□□□□ -1.63
COL1A1P02452 OR4F13P-201ENST00000428478 931 ntBASIC4.84□□□□□ -1.63
COL1A1P02452 AC083863.1-201ENST00000438811 231 ntBASIC4.84□□□□□ -1.63
COL1A1P02452 PSMC1P13-201ENST00000458195 985 ntBASIC4.84□□□□□ -1.63
COL1A1P02452 AC025554.1-201ENST00000505641 188 ntBASIC4.84□□□□□ -1.63
COL1A1P02452 FTH1P11-201ENST00000517577 551 ntBASIC4.84□□□□□ -1.63
COL1A1P02452 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.84□□□□□ -1.63
COL1A1P02452 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL1A1P02452 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.84□□□□□ -1.63
COL1A1P02452 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.84□□□□□ -1.63
COL1A1P02452 CYCSP30-201ENST00000546447 172 ntBASIC4.84□□□□□ -1.63
COL1A1P02452 AC022968.1-201ENST00000567372 442 ntBASIC4.84□□□□□ -1.63
COL1A1P02452 AC025627.2-201ENST00000576220 160 ntBASIC4.84□□□□□ -1.63
COL1A1P02452 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.84□□□□□ -1.63
COL1A1P02452 AL451044.1-201ENST00000604867 238 ntBASIC4.84□□□□□ -1.63
COL1A1P02452 AP005264.7-201ENST00000625003 745 ntBASIC4.84□□□□□ -1.63
COL1A1P02452 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL1A1P02452 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
COL1A1P02452 SMG1P4-204ENST00000523028 4131 ntBASIC4.84□□□□□ -1.63
COL1A1P02452 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
COL1A1P02452 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL1A1P02452 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
COL1A1P02452 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
COL1A1P02452 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
COL1A1P02452 SNORD35B-201ENST00000363660 87 ntBASIC4.83□□□□□ -1.64
COL1A1P02452 SNORA9-201ENST00000384215 133 ntBASIC4.83□□□□□ -1.64
COL1A1P02452 RN7SKP199-201ENST00000410325 305 ntBASIC4.83□□□□□ -1.64
COL1A1P02452 NPM1P34-201ENST00000428821 893 ntBASIC4.83□□□□□ -1.64
COL1A1P02452 OR9M1P-201ENST00000459641 921 ntBASIC4.83□□□□□ -1.64
COL1A1P02452 AC006517.1-201ENST00000480485 328 ntBASIC4.83□□□□□ -1.64
COL1A1P02452 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.83□□□□□ -1.64
COL1A1P02452 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.83□□□□□ -1.64
COL1A1P02452 AC026782.2-201ENST00000510845 636 ntBASIC4.83□□□□□ -1.64
COL1A1P02452 RNA5SP179-201ENST00000517284 121 ntBASIC4.83□□□□□ -1.64
COL1A1P02452 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.83□□□□□ -1.64
COL1A1P02452 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC4.83□□□□□ -1.64
COL1A1P02452 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.83□□□□□ -1.64
COL1A1P02452 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.83□□□□□ -1.64
COL1A1P02452 MIR432-201ENST00000606207 94 ntBASIC4.83□□□□□ -1.64
COL1A1P02452 AL353600.1-201ENST00000608148 251 ntBASIC4.83□□□□□ -1.64
COL1A1P02452 AC019176.2-201ENST00000611579 315 ntBASIC4.83□□□□□ -1.64
COL1A1P02452 AL391261.4-201ENST00000616012 481 ntBASIC4.83□□□□□ -1.64
COL1A1P02452 AC015967.1-201ENST00000619893 476 ntBASIC4.83□□□□□ -1.64
COL1A1P02452 MIR7702-201ENST00000621931 59 ntBASIC4.83□□□□□ -1.64
COL1A1P02452 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC4.83□□□□□ -1.64
COL1A1P02452 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.83□□□□□ -1.64
COL1A1P02452 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC4.83□□□□□ -1.64
COL1A1P02452 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.83□□□□□ -1.64
COL1A1P02452 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL1A1P02452 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.83□□□□□ -1.64
COL1A1P02452 SNORA5A-201ENST00000384111 134 ntBASIC4.82□□□□□ -1.64
COL1A1P02452 DUXAP2-201ENST00000519198 589 ntBASIC4.82□□□□□ -1.64
COL1A1P02452 AC091516.1-201ENST00000549191 703 ntBASIC4.82□□□□□ -1.64
COL1A1P02452 RN7SL339P-201ENST00000580597 296 ntBASIC4.82□□□□□ -1.64
COL1A1P02452 AC015726.1-201ENST00000602353 681 ntBASIC4.82□□□□□ -1.64
COL1A1P02452 AC007179.3-201ENST00000604976 235 ntBASIC4.82□□□□□ -1.64
COL1A1P02452 AC091167.4-201ENST00000605079 184 ntBASIC4.82□□□□□ -1.64
COL1A1P02452 AC007342.8-201ENST00000623278 678 ntBASIC4.82□□□□□ -1.64
COL1A1P02452 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms