Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLPTM1O96005 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLPTM1O96005 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLPTM1O96005 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.43□□□□□ -1.7
CLPTM1O96005 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLPTM1O96005 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLPTM1O96005 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CLPTM1O96005 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLPTM1O96005 RNA5SP507-201ENST00000363603 121 ntBASIC4.43□□□□□ -1.7
CLPTM1O96005 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLPTM1O96005 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.43□□□□□ -1.7
CLPTM1O96005 MIR105-2-201ENST00000385083 81 ntBASIC4.43□□□□□ -1.7
CLPTM1O96005 NUDT19P3-201ENST00000404698 555 ntBASIC4.43□□□□□ -1.7
CLPTM1O96005 ATF1P1-201ENST00000406040 927 ntBASIC4.43□□□□□ -1.7
CLPTM1O96005 RPL23AP48-201ENST00000406913 488 ntBASIC4.43□□□□□ -1.7
CLPTM1O96005 SNORA77-201ENST00000408716 125 ntBASIC4.43□□□□□ -1.7
CLPTM1O96005 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.43□□□□□ -1.7
CLPTM1O96005 RNU2-17P-201ENST00000410290 190 ntBASIC4.43□□□□□ -1.7
CLPTM1O96005 AC096533.1-201ENST00000411645 353 ntBASIC4.43□□□□□ -1.7
CLPTM1O96005 MTCO2P8-201ENST00000412213 658 ntBASIC4.43□□□□□ -1.7
CLPTM1O96005 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.43□□□□□ -1.7
CLPTM1O96005 XKRYP4-201ENST00000414395 483 ntBASIC4.43□□□□□ -1.7
CLPTM1O96005 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.43□□□□□ -1.7
CLPTM1O96005 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC4.43□□□□□ -1.7
CLPTM1O96005 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLPTM1O96005 AC106883.1-201ENST00000418805 562 ntBASIC4.43□□□□□ -1.7
CLPTM1O96005 RPS26P13-201ENST00000419030 330 ntBASIC4.43□□□□□ -1.7
CLPTM1O96005 MTCO1P43-201ENST00000431831 488 ntBASIC4.43□□□□□ -1.7
CLPTM1O96005 AC093716.1-201ENST00000435923 377 ntBASIC4.43□□□□□ -1.7
CLPTM1O96005 PTMAP6-201ENST00000439110 327 ntBASIC4.43□□□□□ -1.7
CLPTM1O96005 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.43□□□□□ -1.7
CLPTM1O96005 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.43□□□□□ -1.7
CLPTM1O96005 XKRYP5-201ENST00000449659 483 ntBASIC4.43□□□□□ -1.7
CLPTM1O96005 HMGB1P5-202ENST00000451497 985 ntBASIC4.43□□□□□ -1.7
CLPTM1O96005 AC069277.2-201ENST00000454211 432 ntBASIC4.43□□□□□ -1.7
CLPTM1O96005 RPL23AP2-201ENST00000471227 466 ntBASIC4.43□□□□□ -1.7
CLPTM1O96005 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.43□□□□□ -1.7
CLPTM1O96005 AC090114.3-201ENST00000479267 829 ntBASIC4.43□□□□□ -1.7
CLPTM1O96005 AC107398.1-201ENST00000486904 505 ntBASIC4.43□□□□□ -1.7
CLPTM1O96005 RN7SKP66-201ENST00000516681 231 ntBASIC4.43□□□□□ -1.7
CLPTM1O96005 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.43□□□□□ -1.7
CLPTM1O96005 AC021451.1-201ENST00000523498 1129 ntBASIC4.43□□□□□ -1.7
CLPTM1O96005 AP000916.1-201ENST00000533869 835 ntBASIC4.43□□□□□ -1.7
CLPTM1O96005 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLPTM1O96005 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.43□□□□□ -1.7
CLPTM1O96005 AC051619.2-201ENST00000559063 397 ntBASIC4.43□□□□□ -1.7
CLPTM1O96005 AC044860.2-201ENST00000561005 179 ntBASIC4.43□□□□□ -1.7
CLPTM1O96005 AC015912.2-201ENST00000571053 181 ntBASIC4.43□□□□□ -1.7
CLPTM1O96005 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.43□□□□□ -1.7
CLPTM1O96005 HMGB2P1-201ENST00000591146 634 ntBASIC4.43□□□□□ -1.7
CLPTM1O96005 AC068020.1-201ENST00000594215 661 ntBASIC4.43□□□□□ -1.7
CLPTM1O96005 SNX6P1-201ENST00000601728 1224 ntBASIC4.43□□□□□ -1.7
CLPTM1O96005 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.43□□□□□ -1.7
CLPTM1O96005 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLPTM1O96005 AL356274.1-201ENST00000617064 410 ntBASIC4.43□□□□□ -1.7
CLPTM1O96005 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.43□□□□□ -1.7
CLPTM1O96005 AP000770.2-201ENST00000623694 100 ntBASIC4.43□□□□□ -1.7
CLPTM1O96005 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.43□□□□□ -1.7
CLPTM1O96005 AC009951.1-201ENST00000623674 2614 ntBASIC4.43□□□□□ -1.7
CLPTM1O96005 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CLPTM1O96005 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLPTM1O96005 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLPTM1O96005 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CLPTM1O96005 AL627171.1-201ENST00000618845 1308 ntBASIC4.43□□□□□ -1.7
CLPTM1O96005 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.43□□□□□ -1.7
CLPTM1O96005 PNPT1P2-201ENST00000456768 2050 ntBASIC4.42□□□□□ -1.7
CLPTM1O96005 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLPTM1O96005 AL133412.1-201ENST00000380194 2992 ntBASIC4.42□□□□□ -1.7
CLPTM1O96005 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLPTM1O96005 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLPTM1O96005 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLPTM1O96005 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CLPTM1O96005 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLPTM1O96005 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLPTM1O96005 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLPTM1O96005 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.42□□□□□ -1.7
CLPTM1O96005 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLPTM1O96005 SNORA70.10-201ENST00000384515 134 ntBASIC4.42□□□□□ -1.7
CLPTM1O96005 HMGB1P10-201ENST00000395823 563 ntBASIC4.42□□□□□ -1.7
CLPTM1O96005 HMGB3P19-201ENST00000403971 560 ntBASIC4.42□□□□□ -1.7
CLPTM1O96005 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.42□□□□□ -1.7
CLPTM1O96005 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.42□□□□□ -1.7
CLPTM1O96005 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLPTM1O96005 RN7SKP213-201ENST00000410746 298 ntBASIC4.42□□□□□ -1.7
CLPTM1O96005 RNA5SP39-201ENST00000411245 120 ntBASIC4.42□□□□□ -1.7
CLPTM1O96005 AL590806.1-201ENST00000415818 853 ntBASIC4.42□□□□□ -1.7
CLPTM1O96005 LINC00993-201ENST00000420453 540 ntBASIC4.42□□□□□ -1.7
CLPTM1O96005 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.42□□□□□ -1.7
CLPTM1O96005 AC241520.1-201ENST00000422654 1099 ntBASIC4.42□□□□□ -1.7
CLPTM1O96005 AC093084.1-201ENST00000424233 687 ntBASIC4.42□□□□□ -1.7
CLPTM1O96005 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLPTM1O96005 RRM2P4-201ENST00000441721 562 ntBASIC4.42□□□□□ -1.7
CLPTM1O96005 RPS27P5-201ENST00000444247 244 ntBASIC4.42□□□□□ -1.7
CLPTM1O96005 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.42□□□□□ -1.7
CLPTM1O96005 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.42□□□□□ -1.7
CLPTM1O96005 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.42□□□□□ -1.7
CLPTM1O96005 snoU109.3-201ENST00000459477 145 ntBASIC4.42□□□□□ -1.7
CLPTM1O96005 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLPTM1O96005 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.42□□□□□ -1.7
CLPTM1O96005 RPL21P47-201ENST00000483696 477 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms