Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC6.91□□□□□ -1.3
RAPGEF3O95398 MIR8059-201ENST00000620427 81 ntBASIC6.91□□□□□ -1.3
RAPGEF3O95398 AC091953.5-201ENST00000622919 233 ntBASIC6.91□□□□□ -1.3
RAPGEF3O95398 AC112484.5-201ENST00000624189 228 ntBASIC6.91□□□□□ -1.3
RAPGEF3O95398 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.91□□□□□ -1.3
RAPGEF3O95398 AC120349.3-201ENST00000624377 529 ntBASIC6.91□□□□□ -1.3
RAPGEF3O95398 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.91□□□□□ -1.3
RAPGEF3O95398 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RAPGEF3O95398 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RAPGEF3O95398 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.91□□□□□ -1.3
RAPGEF3O95398 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
RAPGEF3O95398 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RAPGEF3O95398 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RAPGEF3O95398 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
RAPGEF3O95398 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
RAPGEF3O95398 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RAPGEF3O95398 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RAPGEF3O95398 AC245100.2-201ENST00000454544 1679 ntBASIC6.9□□□□□ -1.3
RAPGEF3O95398 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RAPGEF3O95398 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RAPGEF3O95398 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RAPGEF3O95398 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
RAPGEF3O95398 SNORA63.1-201ENST00000362493 131 ntBASIC6.9□□□□□ -1.3
RAPGEF3O95398 EIF4EBP2P3-201ENST00000403144 334 ntBASIC6.9□□□□□ -1.3
RAPGEF3O95398 AC008280.1-201ENST00000418851 412 ntBASIC6.9□□□□□ -1.3
RAPGEF3O95398 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC6.9□□□□□ -1.3
RAPGEF3O95398 AC092648.1-201ENST00000425870 423 ntBASIC6.9□□□□□ -1.3
RAPGEF3O95398 NDUFA5P10-201ENST00000432147 357 ntBASIC6.9□□□□□ -1.3
RAPGEF3O95398 GOT2P5-201ENST00000433995 546 ntBASIC6.9□□□□□ -1.3
RAPGEF3O95398 DHFRP3-201ENST00000455595 559 ntBASIC6.9□□□□□ -1.3
RAPGEF3O95398 AC245028.2-201ENST00000458673 253 ntBASIC6.9□□□□□ -1.3
RAPGEF3O95398 AC146944.2-203ENST00000502493 354 ntBASIC6.9□□□□□ -1.3
RAPGEF3O95398 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC6.9□□□□□ -1.3
RAPGEF3O95398 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.9□□□□□ -1.3
RAPGEF3O95398 AC006499.6-201ENST00000511169 607 ntBASIC6.9□□□□□ -1.3
RAPGEF3O95398 AC139495.1-202ENST00000513164 354 ntBASIC6.9□□□□□ -1.3
RAPGEF3O95398 MRPS36P5-201ENST00000551909 298 ntBASIC6.9□□□□□ -1.3
RAPGEF3O95398 FKBP1BP1-201ENST00000553366 325 ntBASIC6.9□□□□□ -1.3
RAPGEF3O95398 ZNF971P-201ENST00000562068 1249 ntBASIC6.9□□□□□ -1.3
RAPGEF3O95398 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.9□□□□□ -1.3
RAPGEF3O95398 AC009039.2-201ENST00000624524 529 ntBASIC6.9□□□□□ -1.3
RAPGEF3O95398 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RAPGEF3O95398 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC6.9□□□□□ -1.3
RAPGEF3O95398 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
RAPGEF3O95398 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
RAPGEF3O95398 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.9□□□□□ -1.31
RAPGEF3O95398 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
RAPGEF3O95398 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
RAPGEF3O95398 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
RAPGEF3O95398 AC007159.1-201ENST00000566529 4706 ntBASIC6.89□□□□□ -1.31
RAPGEF3O95398 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.89□□□□□ -1.31
RAPGEF3O95398 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RAPGEF3O95398 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RAPGEF3O95398 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
RAPGEF3O95398 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
RAPGEF3O95398 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.89□□□□□ -1.31
RAPGEF3O95398 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RAPGEF3O95398 RNY3P9-201ENST00000384727 106 ntBASIC6.89□□□□□ -1.31
RAPGEF3O95398 AL034403.1-201ENST00000399414 885 ntBASIC6.89□□□□□ -1.31
RAPGEF3O95398 MTCO2P31-201ENST00000402702 684 ntBASIC6.89□□□□□ -1.31
RAPGEF3O95398 ARL4AP5-201ENST00000404372 599 ntBASIC6.89□□□□□ -1.31
RAPGEF3O95398 RN7SKP16-201ENST00000410180 299 ntBASIC6.89□□□□□ -1.31
RAPGEF3O95398 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC6.89□□□□□ -1.31
RAPGEF3O95398 USP9YP21-201ENST00000420603 432 ntBASIC6.89□□□□□ -1.31
RAPGEF3O95398 RPS29P7-201ENST00000439662 171 ntBASIC6.89□□□□□ -1.31
RAPGEF3O95398 OR10R1P-201ENST00000441524 1141 ntBASIC6.89□□□□□ -1.31
RAPGEF3O95398 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.89□□□□□ -1.31
RAPGEF3O95398 AC023271.1-201ENST00000445936 1090 ntBASIC6.89□□□□□ -1.31
RAPGEF3O95398 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC6.89□□□□□ -1.31
RAPGEF3O95398 HMGB1P5-202ENST00000451497 985 ntBASIC6.89□□□□□ -1.31
RAPGEF3O95398 AC092155.2-201ENST00000454675 477 ntBASIC6.89□□□□□ -1.31
RAPGEF3O95398 AC091564.1-201ENST00000464563 479 ntBASIC6.89□□□□□ -1.31
RAPGEF3O95398 AC128716.1-201ENST00000475129 166 ntBASIC6.89□□□□□ -1.31
RAPGEF3O95398 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC6.89□□□□□ -1.31
RAPGEF3O95398 RPL21P131-201ENST00000497298 483 ntBASIC6.89□□□□□ -1.31
RAPGEF3O95398 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.89□□□□□ -1.31
RAPGEF3O95398 MTATP6P15-201ENST00000527233 835 ntBASIC6.89□□□□□ -1.31
RAPGEF3O95398 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC6.89□□□□□ -1.31
RAPGEF3O95398 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RAPGEF3O95398 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC6.89□□□□□ -1.31
RAPGEF3O95398 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC6.89□□□□□ -1.31
RAPGEF3O95398 MIR4286-201ENST00000580651 93 ntBASIC6.89□□□□□ -1.31
RAPGEF3O95398 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC6.89□□□□□ -1.31
RAPGEF3O95398 AC113368.1-201ENST00000603736 382 ntBASIC6.89□□□□□ -1.31
RAPGEF3O95398 AC012468.1-201ENST00000604888 430 ntBASIC6.89□□□□□ -1.31
RAPGEF3O95398 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC6.89□□□□□ -1.31
RAPGEF3O95398 AL355493.4-201ENST00000618530 292 ntBASIC6.89□□□□□ -1.31
RAPGEF3O95398 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RAPGEF3O95398 OR2L1P-202ENST00000641567 1023 ntBASIC6.89□□□□□ -1.31
RAPGEF3O95398 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RAPGEF3O95398 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.89□□□□□ -1.31
RAPGEF3O95398 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.89□□□□□ -1.31
RAPGEF3O95398 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.89□□□□□ -1.31
RAPGEF3O95398 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
RAPGEF3O95398 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC6.89□□□□□ -1.31
RAPGEF3O95398 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RAPGEF3O95398 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC6.89□□□□□ -1.31
RAPGEF3O95398 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RAPGEF3O95398 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
RAPGEF3O95398 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms