Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AL355852.1-201ENST00000454081 1771 ntBASIC4.53□□□□□ -1.68
NKX2-2O95096 DDX18P5-201ENST00000534547 1306 ntBASIC4.53□□□□□ -1.68
NKX2-2O95096 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.53□□□□□ -1.68
NKX2-2O95096 AL450326.2-201ENST00000421913 1962 ntBASIC4.53□□□□□ -1.68
NKX2-2O95096 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
NKX2-2O95096 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.53□□□□□ -1.68
NKX2-2O95096 RN7SKP95-201ENST00000362860 303 ntBASIC4.53□□□□□ -1.68
NKX2-2O95096 MIR323B-201ENST00000385269 82 ntBASIC4.53□□□□□ -1.68
NKX2-2O95096 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
NKX2-2O95096 SNORA68.2-201ENST00000391263 128 ntBASIC4.53□□□□□ -1.68
NKX2-2O95096 VDAC2P1-201ENST00000399358 958 ntBASIC4.53□□□□□ -1.68
NKX2-2O95096 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.53□□□□□ -1.68
NKX2-2O95096 DPPA2P3-201ENST00000411853 655 ntBASIC4.53□□□□□ -1.68
NKX2-2O95096 GTF2IP5-201ENST00000414608 731 ntBASIC4.53□□□□□ -1.68
NKX2-2O95096 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NKX2-2O95096 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.53□□□□□ -1.68
NKX2-2O95096 PAICSP7-201ENST00000419829 962 ntBASIC4.53□□□□□ -1.68
NKX2-2O95096 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NKX2-2O95096 AL513175.2-201ENST00000422071 443 ntBASIC4.53□□□□□ -1.68
NKX2-2O95096 HIGD1AP12-201ENST00000427832 281 ntBASIC4.53□□□□□ -1.68
NKX2-2O95096 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.53□□□□□ -1.68
NKX2-2O95096 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.53□□□□□ -1.68
NKX2-2O95096 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NKX2-2O95096 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.53□□□□□ -1.68
NKX2-2O95096 CEACAMP7-201ENST00000444105 496 ntBASIC4.53□□□□□ -1.68
NKX2-2O95096 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.53□□□□□ -1.68
NKX2-2O95096 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.53□□□□□ -1.68
NKX2-2O95096 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.53□□□□□ -1.68
NKX2-2O95096 RHEBP2-201ENST00000450289 600 ntBASIC4.53□□□□□ -1.68
NKX2-2O95096 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.53□□□□□ -1.68
NKX2-2O95096 AC026348.1-201ENST00000462549 1053 ntBASIC4.53□□□□□ -1.68
NKX2-2O95096 PPIAP21-201ENST00000464473 501 ntBASIC4.53□□□□□ -1.68
NKX2-2O95096 OR52A4P-201ENST00000472867 958 ntBASIC4.53□□□□□ -1.68
NKX2-2O95096 UBA52P3-201ENST00000491303 382 ntBASIC4.53□□□□□ -1.68
NKX2-2O95096 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.53□□□□□ -1.68
NKX2-2O95096 HMGB3P16-201ENST00000508037 287 ntBASIC4.53□□□□□ -1.68
NKX2-2O95096 RNU6-311P-201ENST00000516224 102 ntBASIC4.53□□□□□ -1.68
NKX2-2O95096 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.53□□□□□ -1.68
NKX2-2O95096 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.53□□□□□ -1.68
NKX2-2O95096 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.53□□□□□ -1.68
NKX2-2O95096 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NKX2-2O95096 AC107918.3-201ENST00000533272 382 ntBASIC4.53□□□□□ -1.68
NKX2-2O95096 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NKX2-2O95096 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.53□□□□□ -1.68
NKX2-2O95096 BNIP3P1-201ENST00000547295 580 ntBASIC4.53□□□□□ -1.68
NKX2-2O95096 AC004217.3-201ENST00000551552 878 ntBASIC4.53□□□□□ -1.68
NKX2-2O95096 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.53□□□□□ -1.68
NKX2-2O95096 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.53□□□□□ -1.68
NKX2-2O95096 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.53□□□□□ -1.68
NKX2-2O95096 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.53□□□□□ -1.68
NKX2-2O95096 SNORA74C-1-201ENST00000580726 201 ntBASIC4.53□□□□□ -1.68
NKX2-2O95096 CCDC58P3-201ENST00000590792 430 ntBASIC4.53□□□□□ -1.68
NKX2-2O95096 AL020997.3-201ENST00000602843 359 ntBASIC4.53□□□□□ -1.68
NKX2-2O95096 AC087763.1-201ENST00000603391 286 ntBASIC4.53□□□□□ -1.68
NKX2-2O95096 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.53□□□□□ -1.68
NKX2-2O95096 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.53□□□□□ -1.68
NKX2-2O95096 AC009318.3-201ENST00000616916 503 ntBASIC4.53□□□□□ -1.68
NKX2-2O95096 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NKX2-2O95096 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
NKX2-2O95096 AC112694.2-201ENST00000623697 768 ntBASIC4.53□□□□□ -1.68
NKX2-2O95096 CR381572.2-201ENST00000624852 397 ntBASIC4.53□□□□□ -1.68
NKX2-2O95096 MFSD8-245ENST00000641743 948 ntBASIC4.53□□□□□ -1.68
NKX2-2O95096 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.53□□□□□ -1.68
NKX2-2O95096 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.53□□□□□ -1.68
NKX2-2O95096 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
NKX2-2O95096 AL031595.2-201ENST00000624215 19071 ntBASIC4.53□□□□□ -1.68
NKX2-2O95096 SMG1P4-204ENST00000523028 4131 ntBASIC4.53□□□□□ -1.68
NKX2-2O95096 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
NKX2-2O95096 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NKX2-2O95096 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.53□□□□□ -1.68
NKX2-2O95096 AL672167.1-204ENST00000641875 3017 ntBASIC4.53□□□□□ -1.68
NKX2-2O95096 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
NKX2-2O95096 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.52□□□□□ -1.69
NKX2-2O95096 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NKX2-2O95096 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.52□□□□□ -1.69
NKX2-2O95096 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NKX2-2O95096 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NKX2-2O95096 OR9K1P-202ENST00000641111 3217 ntBASIC4.52□□□□□ -1.69
NKX2-2O95096 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.52□□□□□ -1.69
NKX2-2O95096 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NKX2-2O95096 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
NKX2-2O95096 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.52□□□□□ -1.69
NKX2-2O95096 RNU4-68P-201ENST00000364314 141 ntBASIC4.52□□□□□ -1.69
NKX2-2O95096 RNU6-146P-201ENST00000384602 108 ntBASIC4.52□□□□□ -1.69
NKX2-2O95096 RNU6-1151P-201ENST00000384684 107 ntBASIC4.52□□□□□ -1.69
NKX2-2O95096 SFR1P1-201ENST00000403720 688 ntBASIC4.52□□□□□ -1.69
NKX2-2O95096 RN7SKP97-201ENST00000410966 333 ntBASIC4.52□□□□□ -1.69
NKX2-2O95096 SSR1P2-201ENST00000415208 787 ntBASIC4.52□□□□□ -1.69
NKX2-2O95096 CHEK2P3-201ENST00000416118 248 ntBASIC4.52□□□□□ -1.69
NKX2-2O95096 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.52□□□□□ -1.69
NKX2-2O95096 AL590609.2-201ENST00000421430 368 ntBASIC4.52□□□□□ -1.69
NKX2-2O95096 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.52□□□□□ -1.69
NKX2-2O95096 AL031736.2-201ENST00000426573 787 ntBASIC4.52□□□□□ -1.69
NKX2-2O95096 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.52□□□□□ -1.69
NKX2-2O95096 AC093414.1-201ENST00000434712 514 ntBASIC4.52□□□□□ -1.69
NKX2-2O95096 AC233982.1-201ENST00000451247 436 ntBASIC4.52□□□□□ -1.69
NKX2-2O95096 RPS3AP53-201ENST00000454716 778 ntBASIC4.52□□□□□ -1.69
NKX2-2O95096 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.52□□□□□ -1.69
NKX2-2O95096 AC096992.1-201ENST00000459808 709 ntBASIC4.52□□□□□ -1.69
NKX2-2O95096 RPL23AP56-201ENST00000460778 453 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms