Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
ZIC3O60481 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
ZIC3O60481 MAPK10-328ENST00000641553 4009 ntBASIC4.47□□□□□ -1.69
ZIC3O60481 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.47□□□□□ -1.69
ZIC3O60481 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
ZIC3O60481 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
ZIC3O60481 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
ZIC3O60481 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.69
ZIC3O60481 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
ZIC3O60481 AC011447.7-201ENST00000624228 1590 ntBASIC4.46□□□□□ -1.7
ZIC3O60481 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ZIC3O60481 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ZIC3O60481 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
ZIC3O60481 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
ZIC3O60481 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
ZIC3O60481 RN7SKP149-201ENST00000363008 344 ntBASIC4.46□□□□□ -1.7
ZIC3O60481 snoZ40.1-201ENST00000364540 72 ntBASIC4.46□□□□□ -1.7
ZIC3O60481 OR1L1-202ENST00000373686 1083 ntBASIC4.46□□□□□ -1.7
ZIC3O60481 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.46□□□□□ -1.7
ZIC3O60481 AL008987.1-201ENST00000415528 237 ntBASIC4.46□□□□□ -1.7
ZIC3O60481 RBMY2KP-201ENST00000418221 992 ntBASIC4.46□□□□□ -1.7
ZIC3O60481 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.46□□□□□ -1.7
ZIC3O60481 GNG5P5-201ENST00000420444 220 ntBASIC4.46□□□□□ -1.7
ZIC3O60481 GAPDHP49-201ENST00000421421 961 ntBASIC4.46□□□□□ -1.7
ZIC3O60481 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.46□□□□□ -1.7
ZIC3O60481 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.46□□□□□ -1.7
ZIC3O60481 AC104837.2-201ENST00000427236 424 ntBASIC4.46□□□□□ -1.7
ZIC3O60481 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.46□□□□□ -1.7
ZIC3O60481 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.46□□□□□ -1.7
ZIC3O60481 CYCSP24-201ENST00000445119 316 ntBASIC4.46□□□□□ -1.7
ZIC3O60481 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.46□□□□□ -1.7
ZIC3O60481 OR52J1P-201ENST00000450596 932 ntBASIC4.46□□□□□ -1.7
ZIC3O60481 MRPL42P4-201ENST00000453267 443 ntBASIC4.46□□□□□ -1.7
ZIC3O60481 BX248409.1-201ENST00000455497 255 ntBASIC4.46□□□□□ -1.7
ZIC3O60481 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.46□□□□□ -1.7
ZIC3O60481 AC005229.2-201ENST00000456995 399 ntBASIC4.46□□□□□ -1.7
ZIC3O60481 RPL35AP28-201ENST00000459730 331 ntBASIC4.46□□□□□ -1.7
ZIC3O60481 RPL23AP12-201ENST00000467573 473 ntBASIC4.46□□□□□ -1.7
ZIC3O60481 NDUFA5P9-201ENST00000472609 340 ntBASIC4.46□□□□□ -1.7
ZIC3O60481 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ZIC3O60481 RN7SL591P-201ENST00000496150 292 ntBASIC4.46□□□□□ -1.7
ZIC3O60481 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.46□□□□□ -1.7
ZIC3O60481 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.46□□□□□ -1.7
ZIC3O60481 AC023632.1-201ENST00000518463 375 ntBASIC4.46□□□□□ -1.7
ZIC3O60481 OR8A2P-201ENST00000528631 952 ntBASIC4.46□□□□□ -1.7
ZIC3O60481 EIF4A2P5-201ENST00000529914 499 ntBASIC4.46□□□□□ -1.7
ZIC3O60481 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.46□□□□□ -1.7
ZIC3O60481 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.46□□□□□ -1.7
ZIC3O60481 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ZIC3O60481 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ZIC3O60481 ZNF321P-202ENST00000550843 495 ntBASIC4.46□□□□□ -1.7
ZIC3O60481 EDDM3DP-201ENST00000554692 434 ntBASIC4.46□□□□□ -1.7
ZIC3O60481 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.46□□□□□ -1.7
ZIC3O60481 AC006349.1-201ENST00000555526 235 ntBASIC4.46□□□□□ -1.7
ZIC3O60481 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.46□□□□□ -1.7
ZIC3O60481 AC009117.1-201ENST00000563948 554 ntBASIC4.46□□□□□ -1.7
ZIC3O60481 BGLT3-201ENST00000564523 994 ntBASIC4.46□□□□□ -1.7
ZIC3O60481 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.46□□□□□ -1.7
ZIC3O60481 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.46□□□□□ -1.7
ZIC3O60481 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.46□□□□□ -1.7
ZIC3O60481 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.46□□□□□ -1.7
ZIC3O60481 BNIP3P24-201ENST00000593398 557 ntBASIC4.46□□□□□ -1.7
ZIC3O60481 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.46□□□□□ -1.7
ZIC3O60481 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.46□□□□□ -1.7
ZIC3O60481 AC020910.3-201ENST00000603701 874 ntBASIC4.46□□□□□ -1.7
ZIC3O60481 AC104687.2-201ENST00000604442 342 ntBASIC4.46□□□□□ -1.7
ZIC3O60481 AC097478.2-201ENST00000610572 514 ntBASIC4.46□□□□□ -1.7
ZIC3O60481 AL049539.1-201ENST00000611964 459 ntBASIC4.46□□□□□ -1.7
ZIC3O60481 BX005214.3-202ENST00000619809 325 ntBASIC4.46□□□□□ -1.7
ZIC3O60481 AC015726.3-201ENST00000624501 418 ntBASIC4.46□□□□□ -1.7
ZIC3O60481 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.46□□□□□ -1.7
ZIC3O60481 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
ZIC3O60481 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.46□□□□□ -1.7
ZIC3O60481 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
ZIC3O60481 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.46□□□□□ -1.7
ZIC3O60481 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ZIC3O60481 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ZIC3O60481 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.46□□□□□ -1.7
ZIC3O60481 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ZIC3O60481 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.45□□□□□ -1.7
ZIC3O60481 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
ZIC3O60481 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
ZIC3O60481 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.45□□□□□ -1.7
ZIC3O60481 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ZIC3O60481 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
ZIC3O60481 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ZIC3O60481 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.45□□□□□ -1.7
ZIC3O60481 SNORA73.1-201ENST00000363107 205 ntBASIC4.45□□□□□ -1.7
ZIC3O60481 RNU6-1214P-201ENST00000363650 109 ntBASIC4.45□□□□□ -1.7
ZIC3O60481 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
ZIC3O60481 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
ZIC3O60481 RNU6-413P-201ENST00000384115 107 ntBASIC4.45□□□□□ -1.7
ZIC3O60481 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ZIC3O60481 AL357515.1-201ENST00000402967 542 ntBASIC4.45□□□□□ -1.7
ZIC3O60481 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.45□□□□□ -1.7
ZIC3O60481 AC013429.2-201ENST00000418798 781 ntBASIC4.45□□□□□ -1.7
ZIC3O60481 AC048351.1-201ENST00000420064 602 ntBASIC4.45□□□□□ -1.7
ZIC3O60481 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.45□□□□□ -1.7
ZIC3O60481 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.45□□□□□ -1.7
ZIC3O60481 AL009174.1-201ENST00000426577 416 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms