Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 RNU6-1320P-201ENST00000390838 107 ntBASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 RNU6-1269P-201ENST00000391139 107 ntBASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 HMGB3P19-201ENST00000403971 560 ntBASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 AC245028.1-201ENST00000423259 256 ntBASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 KCTD9P3-201ENST00000434597 1169 ntBASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 YWHAQP9-201ENST00000445891 512 ntBASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 EIF2S2P2-201ENST00000447161 982 ntBASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 RNU6-599P-201ENST00000459383 107 ntBASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 RNU6-1193P-201ENST00000459461 107 ntBASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 AC105137.1-201ENST00000484355 562 ntBASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 IGBP1P5-201ENST00000507524 1000 ntBASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 AC106806.2-201ENST00000509365 500 ntBASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 AC010342.1-201ENST00000514047 877 ntBASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 AC009643.1-201ENST00000532030 391 ntBASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 AC110743.1-201ENST00000584870 478 ntBASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 AC006116.5-201ENST00000591936 559 ntBASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 MIR6868-201ENST00000611215 58 ntBASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 MIR8059-201ENST00000620427 81 ntBASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 RNU6-368P-201ENST00000620928 107 ntBASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 RNU6-538P-201ENST00000622329 107 ntBASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 UBE3AP2-201ENST00000429033 2259 ntBASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TRAV27A0A087WT01 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 RLIMP2-201ENST00000427891 1563 ntBASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 USP9YP4-201ENST00000424401 1745 ntBASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 RNA5SP399-201ENST00000364003 117 ntBASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 RPS27AP11-201ENST00000402798 447 ntBASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 ZNF603P-201ENST00000405613 487 ntBASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 RN7SKP33-201ENST00000410942 340 ntBASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 TPT1P2-201ENST00000413105 503 ntBASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 RPL7AP73-201ENST00000413490 353 ntBASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 AC108032.1-201ENST00000416706 207 ntBASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 IPMKP1-201ENST00000425988 855 ntBASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 NPM1P34-201ENST00000428821 893 ntBASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 AF228730.2-201ENST00000438784 848 ntBASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 RPS11P1-201ENST00000451072 473 ntBASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 RPL7AP52-201ENST00000458096 790 ntBASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 RN7SL809P-201ENST00000482040 297 ntBASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 RPL7P24-201ENST00000493052 752 ntBASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 AC112184.1-201ENST00000505179 312 ntBASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 HMGB3P13-201ENST00000511263 607 ntBASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 RNA5SP228-201ENST00000516232 133 ntBASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.59□□□□□ -1.83
TRAV27A0A087WT01 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
TRAV27A0A087WT01 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
TRAV27A0A087WT01 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
TRAV27A0A087WT01 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
TRAV27A0A087WT01 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.58□□□□□ -1.84
TRAV27A0A087WT01 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRAV27A0A087WT01 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRAV27A0A087WT01 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TRAV27A0A087WT01 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRAV27A0A087WT01 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
TRAV27A0A087WT01 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.58□□□□□ -1.84
TRAV27A0A087WT01 RPL37P18-201ENST00000411602 243 ntBASIC3.58□□□□□ -1.84
TRAV27A0A087WT01 GAPDHP49-201ENST00000421421 961 ntBASIC3.58□□□□□ -1.84
TRAV27A0A087WT01 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.58□□□□□ -1.84
TRAV27A0A087WT01 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRAV27A0A087WT01 HIGD1AP4-201ENST00000430194 280 ntBASIC3.58□□□□□ -1.84
TRAV27A0A087WT01 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TRAV27A0A087WT01 AC073143.1-201ENST00000436316 395 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms