Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 AC091178.1-203ENST00000584586 279 ntBASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 ADAD1P2-201ENST00000588476 646 ntBASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 AC023762.1-201ENST00000603280 584 ntBASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 AL671309.1-201ENST00000603750 544 ntBASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 AC011374.2-201ENST00000607135 526 ntBASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 AP001033.2-201ENST00000609701 1003 ntBASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 AC005086.4-201ENST00000623065 213 ntBASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 AC010435.1-201ENST00000623353 1177 ntBASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 AP006248.3-201ENST00000623580 594 ntBASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 AC022893.2-201ENST00000564832 3296 ntBASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 AP001002.1-201ENST00000625148 1513 ntBASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ATG4BQ9Y4P1 MAPK10-303ENST00000641324 3959 ntBASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 CYP1D1P-201ENST00000416662 1433 ntBASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 OR4K15-201ENST00000305051 1216 ntBASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 SNORD113.2-201ENST00000364166 89 ntBASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 RNA5SP151-201ENST00000365632 117 ntBASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 MIR659-201ENST00000384963 97 ntBASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 MTND4P11-201ENST00000417020 1058 ntBASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 AC009965.2-201ENST00000425328 970 ntBASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 RPS20P1-201ENST00000434853 354 ntBASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 CBX1P4-201ENST00000439415 457 ntBASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 RPL23AP93-201ENST00000440847 484 ntBASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 AC073587.1-201ENST00000447093 876 ntBASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 TPT1P13-201ENST00000449760 499 ntBASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 CYCSP53-201ENST00000455540 265 ntBASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 RPS20P4-201ENST00000461659 355 ntBASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 CCDC75P1-201ENST00000469247 791 ntBASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 UBA52P3-201ENST00000491303 382 ntBASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 AC093720.1-201ENST00000505681 714 ntBASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 SMARCE1P4-201ENST00000523647 241 ntBASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 AP001781.1-201ENST00000530977 207 ntBASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 AC090525.3-201ENST00000605601 189 ntBASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 AC008966.2-201ENST00000606157 453 ntBASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 MIR1264-201ENST00000616374 69 ntBASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 AC009318.3-201ENST00000616916 503 ntBASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATG4BQ9Y4P1 DHX40P1-201ENST00000588725 1412 ntBASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 IGKV7-3-201ENST00000357453 298 ntBASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 RNU6-317P-201ENST00000384031 107 ntBASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 RNA5SP332-201ENST00000391063 115 ntBASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 GLULP6-201ENST00000399502 913 ntBASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 AC010385.1-201ENST00000412374 256 ntBASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 RAD23BP1-201ENST00000421404 1227 ntBASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 MORF4L1P7-201ENST00000426038 703 ntBASIC4.29□□□□□ -1.72
ATG4BQ9Y4P1 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms