Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 RNU6-1251P-201ENST00000364502 107 ntBASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 Y_RNA.303-201ENST00000364998 94 ntBASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 Y_RNA.390-201ENST00000383932 102 ntBASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 SNORA48.4-201ENST00000391089 134 ntBASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 AC005522.1-201ENST00000395416 346 ntBASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 HMGB1P20-201ENST00000402555 677 ntBASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 RN7SKP229-201ENST00000410465 302 ntBASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 CTSL3P-202ENST00000412179 788 ntBASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 IPMKP1-201ENST00000425988 855 ntBASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 AC127526.2-201ENST00000426436 775 ntBASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 SUMO2P3-201ENST00000438311 288 ntBASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 MTND3P1-201ENST00000441336 220 ntBASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 TPMTP4-201ENST00000450749 678 ntBASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 CFTRP1-201ENST00000456646 183 ntBASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 CCDC75P1-201ENST00000469247 791 ntBASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 RPL35AP19-201ENST00000469425 329 ntBASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 AP000797.2-201ENST00000475768 606 ntBASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 RPL7L1P4-201ENST00000513004 707 ntBASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 FABP5P5-201ENST00000515537 406 ntBASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 UBE2NP1-201ENST00000545592 458 ntBASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 ADI1P3-201ENST00000549509 470 ntBASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 RPS3AP4-201ENST00000555161 764 ntBASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 AC012414.6-201ENST00000568241 401 ntBASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 AC012417.1-201ENST00000582307 1039 ntBASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 OR4G1P-201ENST00000588632 938 ntBASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 ELOCP28-201ENST00000590044 317 ntBASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 AC007684.1-201ENST00000609671 477 ntBASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 AC244107.2-201ENST00000611773 76 ntBASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 DLEU2_1.1-201ENST00000612089 120 ntBASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 DLEU2_1.2-201ENST00000614667 120 ntBASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 AC026368.1-201ENST00000614934 690 ntBASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 RN7SL544P-201ENST00000617232 284 ntBASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 RN7SL763P-201ENST00000620922 284 ntBASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 AC008443.7-201ENST00000622195 246 ntBASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 AC063976.2-201ENST00000425667 3556 ntBASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.18□□□□□ -1.58
PACSIN3Q9UKS6 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 AL355852.1-201ENST00000454081 1771 ntBASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 AL391994.1-201ENST00000254724 282 ntBASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 AL672167.1-206ENST00000356293 943 ntBASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 RNA5SP46-201ENST00000362370 120 ntBASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 RN7SKP16-201ENST00000410180 299 ntBASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 RPL21P43-201ENST00000425440 472 ntBASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 AL121776.1-201ENST00000429337 372 ntBASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 USP9YP29-201ENST00000445112 563 ntBASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 TPT1P7-201ENST00000458300 517 ntBASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 MTCO3P38-201ENST00000468910 766 ntBASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 AC023424.1-201ENST00000496058 459 ntBASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 HMGB3P13-201ENST00000511263 607 ntBASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 HIGD1AP18-201ENST00000520730 278 ntBASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 AP001317.1-201ENST00000531194 960 ntBASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PACSIN3Q9UKS6 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms