Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.13□□□□□ -1.59
SCN11AQ9UI33 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.13□□□□□ -1.59
SCN11AQ9UI33 SRGNP1-201ENST00000603392 451 ntBASIC5.13□□□□□ -1.59
SCN11AQ9UI33 MIR7154-201ENST00000620673 73 ntBASIC5.13□□□□□ -1.59
SCN11AQ9UI33 AL079305.1-201ENST00000623159 3008 ntBASIC5.13□□□□□ -1.59
SCN11AQ9UI33 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.13□□□□□ -1.59
SCN11AQ9UI33 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SCN11AQ9UI33 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SCN11AQ9UI33 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.13□□□□□ -1.59
SCN11AQ9UI33 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SCN11AQ9UI33 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.13□□□□□ -1.59
SCN11AQ9UI33 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5.12□□□□□ -1.59
SCN11AQ9UI33 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SCN11AQ9UI33 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SCN11AQ9UI33 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SCN11AQ9UI33 AL355596.1-201ENST00000565399 3996 ntBASIC5.12□□□□□ -1.59
SCN11AQ9UI33 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SCN11AQ9UI33 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.12□□□□□ -1.59
SCN11AQ9UI33 Z97055.1-201ENST00000419730 712 ntBASIC5.12□□□□□ -1.59
SCN11AQ9UI33 AC008155.2-201ENST00000464337 397 ntBASIC5.12□□□□□ -1.59
SCN11AQ9UI33 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SCN11AQ9UI33 MTND1P6-201ENST00000523621 946 ntBASIC5.12□□□□□ -1.59
SCN11AQ9UI33 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.12□□□□□ -1.59
SCN11AQ9UI33 AC079171.1-201ENST00000568788 914 ntBASIC5.12□□□□□ -1.59
SCN11AQ9UI33 SNORA51-201ENST00000606420 132 ntBASIC5.12□□□□□ -1.59
SCN11AQ9UI33 AC026979.4-201ENST00000606555 645 ntBASIC5.12□□□□□ -1.59
SCN11AQ9UI33 AC009093.8-201ENST00000641769 292 ntBASIC5.12□□□□□ -1.59
SCN11AQ9UI33 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SCN11AQ9UI33 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SCN11AQ9UI33 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.12□□□□□ -1.59
SCN11AQ9UI33 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SCN11AQ9UI33 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SCN11AQ9UI33 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SCN11AQ9UI33 RPL21P17-201ENST00000397467 475 ntBASIC5.11□□□□□ -1.59
SCN11AQ9UI33 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.11□□□□□ -1.59
SCN11AQ9UI33 ACTR3P3-201ENST00000480448 893 ntBASIC5.11□□□□□ -1.59
SCN11AQ9UI33 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.11□□□□□ -1.59
SCN11AQ9UI33 HSPE1P5-201ENST00000561489 272 ntBASIC5.11□□□□□ -1.59
SCN11AQ9UI33 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.11□□□□□ -1.59
SCN11AQ9UI33 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.11□□□□□ -1.59
SCN11AQ9UI33 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.11□□□□□ -1.59
SCN11AQ9UI33 AC095038.2-201ENST00000621464 1070 ntBASIC5.11□□□□□ -1.59
SCN11AQ9UI33 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
SCN11AQ9UI33 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SCN11AQ9UI33 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.11□□□□□ -1.59
SCN11AQ9UI33 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
SCN11AQ9UI33 AL356274.2-201ENST00000624379 3752 ntBASIC5.11□□□□□ -1.59
SCN11AQ9UI33 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
SCN11AQ9UI33 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
SCN11AQ9UI33 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
SCN11AQ9UI33 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
SCN11AQ9UI33 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SCN11AQ9UI33 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SCN11AQ9UI33 SNORD35B-201ENST00000363660 87 ntBASIC5.11□□□□□ -1.59
SCN11AQ9UI33 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.11□□□□□ -1.59
SCN11AQ9UI33 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.11□□□□□ -1.59
SCN11AQ9UI33 AL050321.1-201ENST00000432363 400 ntBASIC5.11□□□□□ -1.59
SCN11AQ9UI33 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.11□□□□□ -1.59
SCN11AQ9UI33 PAICSP4-201ENST00000517543 1253 ntBASIC5.11□□□□□ -1.59
SCN11AQ9UI33 AC025627.2-201ENST00000576220 160 ntBASIC5.11□□□□□ -1.59
SCN11AQ9UI33 RNU1-30P-201ENST00000606575 163 ntBASIC5.11□□□□□ -1.59
SCN11AQ9UI33 OR51C1P-201ENST00000608504 942 ntBASIC5.11□□□□□ -1.59
SCN11AQ9UI33 AC020978.9-201ENST00000624380 1141 ntBASIC5.11□□□□□ -1.59
SCN11AQ9UI33 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.11□□□□□ -1.59
SCN11AQ9UI33 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SCN11AQ9UI33 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SCN11AQ9UI33 AL138820.1-201ENST00000617901 5305 ntBASIC5.1□□□□□ -1.59
SCN11AQ9UI33 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SCN11AQ9UI33 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SCN11AQ9UI33 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SCN11AQ9UI33 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
SCN11AQ9UI33 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SCN11AQ9UI33 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SCN11AQ9UI33 MIR7-3-201ENST00000384898 110 ntBASIC5.1□□□□□ -1.59
SCN11AQ9UI33 TRIM60P17-201ENST00000415181 719 ntBASIC5.1□□□□□ -1.59
SCN11AQ9UI33 ARL4AP3-201ENST00000441452 574 ntBASIC5.1□□□□□ -1.59
SCN11AQ9UI33 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.1□□□□□ -1.59
SCN11AQ9UI33 CYCSP53-201ENST00000455540 265 ntBASIC5.1□□□□□ -1.59
SCN11AQ9UI33 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.1□□□□□ -1.59
SCN11AQ9UI33 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
SCN11AQ9UI33 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.1□□□□□ -1.59
SCN11AQ9UI33 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.1□□□□□ -1.59
SCN11AQ9UI33 AC027807.1-201ENST00000559921 996 ntBASIC5.1□□□□□ -1.59
SCN11AQ9UI33 AL157762.1-201ENST00000619612 415 ntBASIC5.1□□□□□ -1.59
SCN11AQ9UI33 AC124312.6-202ENST00000623624 418 ntBASIC5.1□□□□□ -1.59
SCN11AQ9UI33 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.1□□□□□ -1.59
SCN11AQ9UI33 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.1□□□□□ -1.59
SCN11AQ9UI33 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
SCN11AQ9UI33 GVINP1-202ENST00000531871 7271 ntBASIC5.1□□□□□ -1.59
SCN11AQ9UI33 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
SCN11AQ9UI33 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.1□□□□□ -1.59
SCN11AQ9UI33 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SCN11AQ9UI33 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SCN11AQ9UI33 ZNF962P-201ENST00000443465 3140 ntBASIC5.1□□□□□ -1.59
SCN11AQ9UI33 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SCN11AQ9UI33 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SCN11AQ9UI33 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.09□□□□□ -1.59
SCN11AQ9UI33 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SCN11AQ9UI33 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.09□□□□□ -1.59
SCN11AQ9UI33 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms