Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 HSPD1P16-201ENST00000402302 394 ntBASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 SNORA3C-201ENST00000408792 125 ntBASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 DNAJC19P7-201ENST00000428811 344 ntBASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 COX6B1P7-201ENST00000430845 235 ntBASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 BTF3P10-201ENST00000433415 495 ntBASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 AC006011.1-201ENST00000442758 349 ntBASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 CYCSP42-201ENST00000450823 238 ntBASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 SEPT14P1-201ENST00000458703 648 ntBASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 RN7SL271P-201ENST00000487601 295 ntBASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 RPL29P14-201ENST00000495837 428 ntBASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 VWA8P1-201ENST00000510889 176 ntBASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 RNU7-143P-201ENST00000516781 65 ntBASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 AC068446.3-201ENST00000555285 382 ntBASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 AC079171.1-201ENST00000568788 914 ntBASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 MIR4330-201ENST00000579077 105 ntBASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 AC004948.1-201ENST00000609858 672 ntBASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 AC116667.1-201ENST00000604855 2072 ntBASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 AC074029.4-201ENST00000624796 1859 ntBASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 AC073429.2-201ENST00000569694 1444 ntBASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.94□□□□□ -1.78
VPS29Q9UBQ0 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 KPNA2P2-201ENST00000419546 1489 ntBASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 MIR365B-201ENST00000362317 111 ntBASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 MIR585-201ENST00000384887 94 ntBASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 AL136131.1-201ENST00000406079 803 ntBASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 RNA5SP306-201ENST00000411087 107 ntBASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 RPL37P18-201ENST00000411602 243 ntBASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 RPL23AP26-201ENST00000412728 464 ntBASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 RPL26P29-201ENST00000415623 438 ntBASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 NANOGP6-201ENST00000429190 847 ntBASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 VDAC1P6-201ENST00000430062 855 ntBASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 MTCO1P54-201ENST00000430139 712 ntBASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 AC022022.1-201ENST00000430304 178 ntBASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 RPS20P1-201ENST00000434853 354 ntBASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 AL121877.1-201ENST00000453704 622 ntBASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 SBDSP1-204ENST00000453858 737 ntBASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 RPL7P1-201ENST00000468161 747 ntBASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 RPL7P9-201ENST00000468715 747 ntBASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 AC037198.2-201ENST00000478845 733 ntBASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 AC108475.1-201ENST00000507880 950 ntBASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 MIR4277-201ENST00000578298 84 ntBASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 MIR4443-201ENST00000585052 53 ntBASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 AC008536.1-201ENST00000602872 669 ntBASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 AC104785.1-201ENST00000603220 588 ntBASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 AL139395.1-201ENST00000603662 160 ntBASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 AC114781.5-201ENST00000615297 108 ntBASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 AC011944.2-201ENST00000624440 683 ntBASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 AP000843.1-201ENST00000624880 701 ntBASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 AL773545.4-201ENST00000637262 310 ntBASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 AL513478.4-201ENST00000641636 310 ntBASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
VPS29Q9UBQ0 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 RNU6-1331P-201ENST00000363658 106 ntBASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 RPL23AP48-201ENST00000406913 488 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms