Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.59□□□□□ -1.67
SPASTQ9UBP0 AC015804.1-201ENST00000622935 435 ntBASIC4.59□□□□□ -1.67
SPASTQ9UBP0 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SPASTQ9UBP0 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.59□□□□□ -1.68
SPASTQ9UBP0 AP001273.1-201ENST00000624493 3152 ntBASIC4.59□□□□□ -1.68
SPASTQ9UBP0 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SPASTQ9UBP0 DHX9P1-201ENST00000436565 3076 ntBASIC4.59□□□□□ -1.68
SPASTQ9UBP0 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SPASTQ9UBP0 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.68
SPASTQ9UBP0 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SPASTQ9UBP0 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SPASTQ9UBP0 AC022893.2-201ENST00000564832 3296 ntBASIC4.58□□□□□ -1.68
SPASTQ9UBP0 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
SPASTQ9UBP0 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SPASTQ9UBP0 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.58□□□□□ -1.68
SPASTQ9UBP0 SNORA70.2-201ENST00000364506 135 ntBASIC4.58□□□□□ -1.68
SPASTQ9UBP0 U3.22-201ENST00000391120 215 ntBASIC4.58□□□□□ -1.68
SPASTQ9UBP0 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SPASTQ9UBP0 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.58□□□□□ -1.68
SPASTQ9UBP0 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.58□□□□□ -1.68
SPASTQ9UBP0 VN1R37P-201ENST00000419096 748 ntBASIC4.58□□□□□ -1.68
SPASTQ9UBP0 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.58□□□□□ -1.68
SPASTQ9UBP0 RPEP3-201ENST00000425462 676 ntBASIC4.58□□□□□ -1.68
SPASTQ9UBP0 AC073143.1-201ENST00000436316 395 ntBASIC4.58□□□□□ -1.68
SPASTQ9UBP0 RPS26P2-201ENST00000440331 348 ntBASIC4.58□□□□□ -1.68
SPASTQ9UBP0 XKRY2-201ENST00000442362 1093 ntBASIC4.58□□□□□ -1.68
SPASTQ9UBP0 EEF1A1P1-201ENST00000447052 739 ntBASIC4.58□□□□□ -1.68
SPASTQ9UBP0 EIF2S2P2-201ENST00000447161 982 ntBASIC4.58□□□□□ -1.68
SPASTQ9UBP0 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SPASTQ9UBP0 AC006511.1-201ENST00000470614 315 ntBASIC4.58□□□□□ -1.68
SPASTQ9UBP0 AC068587.1-201ENST00000483613 781 ntBASIC4.58□□□□□ -1.68
SPASTQ9UBP0 MTND4LP2-201ENST00000502312 285 ntBASIC4.58□□□□□ -1.68
SPASTQ9UBP0 ARL4AP1-201ENST00000503220 705 ntBASIC4.58□□□□□ -1.68
SPASTQ9UBP0 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.58□□□□□ -1.68
SPASTQ9UBP0 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SPASTQ9UBP0 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.58□□□□□ -1.68
SPASTQ9UBP0 AC015795.1-201ENST00000513669 327 ntBASIC4.58□□□□□ -1.68
SPASTQ9UBP0 TCP11X3P-202ENST00000514289 1254 ntBASIC4.58□□□□□ -1.68
SPASTQ9UBP0 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.58□□□□□ -1.68
SPASTQ9UBP0 AP001781.1-201ENST00000530977 207 ntBASIC4.58□□□□□ -1.68
SPASTQ9UBP0 AC022882.1-201ENST00000532142 501 ntBASIC4.58□□□□□ -1.68
SPASTQ9UBP0 AC027176.2-201ENST00000559166 746 ntBASIC4.58□□□□□ -1.68
SPASTQ9UBP0 AC084783.1-201ENST00000565846 910 ntBASIC4.58□□□□□ -1.68
SPASTQ9UBP0 AL035461.2-201ENST00000619201 524 ntBASIC4.58□□□□□ -1.68
SPASTQ9UBP0 BMS1P21-201ENST00000634565 365 ntBASIC4.58□□□□□ -1.68
SPASTQ9UBP0 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.58□□□□□ -1.68
SPASTQ9UBP0 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SPASTQ9UBP0 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.58□□□□□ -1.68
SPASTQ9UBP0 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
SPASTQ9UBP0 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
SPASTQ9UBP0 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
SPASTQ9UBP0 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SPASTQ9UBP0 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.58□□□□□ -1.68
SPASTQ9UBP0 OR14L1P-202ENST00000641545 3009 ntBASIC4.58□□□□□ -1.68
SPASTQ9UBP0 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SPASTQ9UBP0 MAPK10-303ENST00000641324 3959 ntBASIC4.57□□□□□ -1.68
SPASTQ9UBP0 AL445487.1-201ENST00000415694 1580 ntBASIC4.57□□□□□ -1.68
SPASTQ9UBP0 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SPASTQ9UBP0 AC006042.3-201ENST00000454684 1469 ntBASIC4.57□□□□□ -1.68
SPASTQ9UBP0 VN2R3P-201ENST00000422626 1412 ntBASIC4.57□□□□□ -1.68
SPASTQ9UBP0 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SPASTQ9UBP0 U3.35-201ENST00000408405 208 ntBASIC4.57□□□□□ -1.68
SPASTQ9UBP0 SEC63P1-201ENST00000425785 1258 ntBASIC4.57□□□□□ -1.68
SPASTQ9UBP0 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.57□□□□□ -1.68
SPASTQ9UBP0 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.57□□□□□ -1.68
SPASTQ9UBP0 SYT14P1-201ENST00000481459 721 ntBASIC4.57□□□□□ -1.68
SPASTQ9UBP0 AC093663.2-201ENST00000484625 313 ntBASIC4.57□□□□□ -1.68
SPASTQ9UBP0 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.57□□□□□ -1.68
SPASTQ9UBP0 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.57□□□□□ -1.68
SPASTQ9UBP0 RN7SKP141-201ENST00000516167 338 ntBASIC4.57□□□□□ -1.68
SPASTQ9UBP0 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.57□□□□□ -1.68
SPASTQ9UBP0 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.57□□□□□ -1.68
SPASTQ9UBP0 AP002812.4-201ENST00000532139 286 ntBASIC4.57□□□□□ -1.68
SPASTQ9UBP0 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SPASTQ9UBP0 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.57□□□□□ -1.68
SPASTQ9UBP0 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.57□□□□□ -1.68
SPASTQ9UBP0 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.57□□□□□ -1.68
SPASTQ9UBP0 HMGB3P26-201ENST00000560051 582 ntBASIC4.57□□□□□ -1.68
SPASTQ9UBP0 AC136624.4-201ENST00000573044 370 ntBASIC4.57□□□□□ -1.68
SPASTQ9UBP0 AC008782.1-201ENST00000603386 430 ntBASIC4.57□□□□□ -1.68
SPASTQ9UBP0 AC233280.2-201ENST00000603917 1070 ntBASIC4.57□□□□□ -1.68
SPASTQ9UBP0 IMMP1LP1-201ENST00000605170 488 ntBASIC4.57□□□□□ -1.68
SPASTQ9UBP0 AL445423.1-201ENST00000609941 536 ntBASIC4.57□□□□□ -1.68
SPASTQ9UBP0 AL121873.1-201ENST00000616013 524 ntBASIC4.57□□□□□ -1.68
SPASTQ9UBP0 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.57□□□□□ -1.68
SPASTQ9UBP0 OR2L1P-202ENST00000641567 1023 ntBASIC4.57□□□□□ -1.68
SPASTQ9UBP0 AL596275.2-204ENST00000641628 552 ntBASIC4.57□□□□□ -1.68
SPASTQ9UBP0 AL596275.2-206ENST00000641957 626 ntBASIC4.57□□□□□ -1.68
SPASTQ9UBP0 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.57□□□□□ -1.68
SPASTQ9UBP0 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.57□□□□□ -1.68
SPASTQ9UBP0 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.57□□□□□ -1.68
SPASTQ9UBP0 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
SPASTQ9UBP0 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.57□□□□□ -1.68
SPASTQ9UBP0 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SPASTQ9UBP0 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.57□□□□□ -1.68
SPASTQ9UBP0 OR51H2P-202ENST00000641424 3046 ntBASIC4.57□□□□□ -1.68
SPASTQ9UBP0 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SPASTQ9UBP0 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.57□□□□□ -1.68
SPASTQ9UBP0 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
SPASTQ9UBP0 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms