Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.85□□□□□ -1.47
VTA1Q9NP79 RN7SKP149-201ENST00000363008 344 ntBASIC5.85□□□□□ -1.47
VTA1Q9NP79 Y_RNA.192-201ENST00000363977 102 ntBASIC5.85□□□□□ -1.47
VTA1Q9NP79 RN7SKP153-201ENST00000365026 316 ntBASIC5.85□□□□□ -1.47
VTA1Q9NP79 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
VTA1Q9NP79 PAICSP7-201ENST00000419829 962 ntBASIC5.85□□□□□ -1.47
VTA1Q9NP79 MRPS36P1-201ENST00000421291 307 ntBASIC5.85□□□□□ -1.47
VTA1Q9NP79 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.85□□□□□ -1.47
VTA1Q9NP79 NIPA2P1-201ENST00000426223 976 ntBASIC5.85□□□□□ -1.47
VTA1Q9NP79 USP9YP9-201ENST00000429406 715 ntBASIC5.85□□□□□ -1.47
VTA1Q9NP79 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.85□□□□□ -1.47
VTA1Q9NP79 AC090018.1-201ENST00000434369 367 ntBASIC5.85□□□□□ -1.47
VTA1Q9NP79 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.85□□□□□ -1.47
VTA1Q9NP79 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC5.85□□□□□ -1.47
VTA1Q9NP79 AC022133.1-201ENST00000490961 571 ntBASIC5.85□□□□□ -1.47
VTA1Q9NP79 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VTA1Q9NP79 IGBP1P5-201ENST00000507524 1000 ntBASIC5.85□□□□□ -1.47
VTA1Q9NP79 AC109445.1-201ENST00000512356 383 ntBASIC5.85□□□□□ -1.47
VTA1Q9NP79 TCP11X3P-202ENST00000514289 1254 ntBASIC5.85□□□□□ -1.47
VTA1Q9NP79 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.85□□□□□ -1.47
VTA1Q9NP79 AC008562.1-201ENST00000521763 330 ntBASIC5.85□□□□□ -1.47
VTA1Q9NP79 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.85□□□□□ -1.47
VTA1Q9NP79 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.85□□□□□ -1.47
VTA1Q9NP79 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.85□□□□□ -1.47
VTA1Q9NP79 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.85□□□□□ -1.47
VTA1Q9NP79 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.85□□□□□ -1.47
VTA1Q9NP79 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.85□□□□□ -1.47
VTA1Q9NP79 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.85□□□□□ -1.47
VTA1Q9NP79 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.85□□□□□ -1.47
VTA1Q9NP79 NTAN1P1-201ENST00000603150 646 ntBASIC5.85□□□□□ -1.47
VTA1Q9NP79 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.85□□□□□ -1.47
VTA1Q9NP79 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VTA1Q9NP79 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
VTA1Q9NP79 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.85□□□□□ -1.47
VTA1Q9NP79 AC092079.1-201ENST00000558620 1985 ntBASIC5.85□□□□□ -1.47
VTA1Q9NP79 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.85□□□□□ -1.47
VTA1Q9NP79 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VTA1Q9NP79 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
VTA1Q9NP79 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.85□□□□□ -1.47
VTA1Q9NP79 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VTA1Q9NP79 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
VTA1Q9NP79 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
VTA1Q9NP79 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
VTA1Q9NP79 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
VTA1Q9NP79 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
VTA1Q9NP79 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.84□□□□□ -1.47
VTA1Q9NP79 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.84□□□□□ -1.47
VTA1Q9NP79 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
VTA1Q9NP79 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
VTA1Q9NP79 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
VTA1Q9NP79 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VTA1Q9NP79 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VTA1Q9NP79 RNU6-619P-201ENST00000365146 108 ntBASIC5.84□□□□□ -1.47
VTA1Q9NP79 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
VTA1Q9NP79 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
VTA1Q9NP79 SNORA56-201ENST00000383966 129 ntBASIC5.84□□□□□ -1.47
VTA1Q9NP79 TAF9BP1-201ENST00000396646 746 ntBASIC5.84□□□□□ -1.47
VTA1Q9NP79 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VTA1Q9NP79 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.84□□□□□ -1.47
VTA1Q9NP79 RN7SKP17-201ENST00000411242 351 ntBASIC5.84□□□□□ -1.47
VTA1Q9NP79 CHEK2P3-201ENST00000416118 248 ntBASIC5.84□□□□□ -1.47
VTA1Q9NP79 GTF2IP23-201ENST00000423746 351 ntBASIC5.84□□□□□ -1.47
VTA1Q9NP79 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.84□□□□□ -1.47
VTA1Q9NP79 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.84□□□□□ -1.47
VTA1Q9NP79 AC234781.2-201ENST00000426370 994 ntBASIC5.84□□□□□ -1.47
VTA1Q9NP79 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.84□□□□□ -1.47
VTA1Q9NP79 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.84□□□□□ -1.47
VTA1Q9NP79 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.84□□□□□ -1.47
VTA1Q9NP79 RHOT1P3-201ENST00000436571 331 ntBASIC5.84□□□□□ -1.47
VTA1Q9NP79 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.84□□□□□ -1.47
VTA1Q9NP79 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.84□□□□□ -1.47
VTA1Q9NP79 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.84□□□□□ -1.47
VTA1Q9NP79 RPL21P134-201ENST00000453468 483 ntBASIC5.84□□□□□ -1.47
VTA1Q9NP79 RPL7AP52-201ENST00000458096 790 ntBASIC5.84□□□□□ -1.47
VTA1Q9NP79 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.84□□□□□ -1.47
VTA1Q9NP79 COX6B1P5-201ENST00000509843 249 ntBASIC5.84□□□□□ -1.47
VTA1Q9NP79 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.84□□□□□ -1.47
VTA1Q9NP79 AC090819.1-201ENST00000523800 1111 ntBASIC5.84□□□□□ -1.47
VTA1Q9NP79 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.84□□□□□ -1.47
VTA1Q9NP79 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.84□□□□□ -1.47
VTA1Q9NP79 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC5.84□□□□□ -1.47
VTA1Q9NP79 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.84□□□□□ -1.47
VTA1Q9NP79 OR4C2P-201ENST00000530855 1064 ntBASIC5.84□□□□□ -1.47
VTA1Q9NP79 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.84□□□□□ -1.47
VTA1Q9NP79 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.84□□□□□ -1.47
VTA1Q9NP79 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.84□□□□□ -1.47
VTA1Q9NP79 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC5.84□□□□□ -1.47
VTA1Q9NP79 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
VTA1Q9NP79 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.84□□□□□ -1.47
VTA1Q9NP79 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.84□□□□□ -1.47
VTA1Q9NP79 DUXAP11-201ENST00000603858 526 ntBASIC5.84□□□□□ -1.47
VTA1Q9NP79 AC139792.2-201ENST00000624218 587 ntBASIC5.84□□□□□ -1.47
VTA1Q9NP79 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.84□□□□□ -1.47
VTA1Q9NP79 AC097063.1-201ENST00000426714 1797 ntBASIC5.84□□□□□ -1.47
VTA1Q9NP79 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
VTA1Q9NP79 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VTA1Q9NP79 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.84□□□□□ -1.47
VTA1Q9NP79 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VTA1Q9NP79 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VTA1Q9NP79 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms