Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.23□□□□□ -1.57
TRIM54Q9BYV2 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
TRIM54Q9BYV2 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM54Q9BYV2 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM54Q9BYV2 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM54Q9BYV2 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM54Q9BYV2 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM54Q9BYV2 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM54Q9BYV2 AC092162.3-201ENST00000624511 1624 ntBASIC5.23□□□□□ -1.57
TRIM54Q9BYV2 AL049737.1-201ENST00000413920 1403 ntBASIC5.23□□□□□ -1.57
TRIM54Q9BYV2 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.23□□□□□ -1.57
TRIM54Q9BYV2 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 SMG1P4-204ENST00000523028 4131 ntBASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 AL512646.1-201ENST00000269395 1077 ntBASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 OR9G4-201ENST00000302957 984 ntBASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 MIR323A-201ENST00000362199 86 ntBASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 RNU4-4P-201ENST00000364588 130 ntBASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 ATP5F1P3-201ENST00000397213 657 ntBASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 RPL21P67-201ENST00000402896 478 ntBASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 MIR1302-8-201ENST00000408342 128 ntBASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 RNA5SP296-201ENST00000410523 111 ntBASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 AC104843.2-201ENST00000427666 297 ntBASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 AC016724.1-201ENST00000453215 421 ntBASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 RNU7-125P-201ENST00000458760 62 ntBASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 AC008885.2-201ENST00000509506 930 ntBASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 MTND1P22-201ENST00000510572 951 ntBASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 AC109471.1-201ENST00000511631 612 ntBASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 RNU6-1225P-201ENST00000516336 65 ntBASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 AC006272.2-201ENST00000594725 163 ntBASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 AC006539.2-201ENST00000601729 572 ntBASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 AC091488.1-201ENST00000604239 660 ntBASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 AC009597.2-201ENST00000604659 592 ntBASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 AC106791.2-201ENST00000604680 391 ntBASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 AL355816.1-201ENST00000607951 118 ntBASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 AC234782.5-201ENST00000617723 324 ntBASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 AC026124.2-201ENST00000621847 656 ntBASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 AC068137.4-201ENST00000638485 296 ntBASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 AC053481.2-202ENST00000582394 1500 ntBASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 DBF4P1-201ENST00000412976 1892 ntBASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 AC109315.1-201ENST00000584143 1347 ntBASIC5.22□□□□□ -1.57
TRIM54Q9BYV2 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.21□□□□□ -1.57
TRIM54Q9BYV2 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.57
TRIM54Q9BYV2 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
TRIM54Q9BYV2 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.21□□□□□ -1.57
TRIM54Q9BYV2 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 IL6STP1-201ENST00000346911 1020 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 RNU6-1066P-201ENST00000363573 105 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms