Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 AC103833.1-201ENST00000517442 172 ntBASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 AP001880.2-201ENST00000538233 448 ntBASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 AC122134.1-202ENST00000569111 1201 ntBASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 DNAJC19P3-201ENST00000594491 331 ntBASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 AC005034.4-201ENST00000603612 899 ntBASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 BNIP3P19-201ENST00000605397 577 ntBASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 RN7SL722P-201ENST00000617780 284 ntBASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 RN7SL565P-201ENST00000618246 284 ntBASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 AP006248.3-201ENST00000623580 594 ntBASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 PNPT1P2-201ENST00000456768 2050 ntBASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 AC132825.1-201ENST00000463573 2247 ntBASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 MTND4P10-201ENST00000446199 1363 ntBASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 AC021146.4-201ENST00000309229 279 ntBASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 FAM3C2-201ENST00000312214 681 ntBASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 RN7SKP15-201ENST00000364742 309 ntBASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 SNORA71.2-201ENST00000364941 134 ntBASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 Z86062.1-201ENST00000406773 777 ntBASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 MIR1911-201ENST00000410783 80 ntBASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 GTF3AP1-201ENST00000416942 1004 ntBASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 BTF3P9-201ENST00000418784 283 ntBASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 RPEP2-201ENST00000432149 701 ntBASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 EXTL2P1-201ENST00000446218 416 ntBASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 AC015908.1-201ENST00000478739 476 ntBASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 AC109458.1-201ENST00000508858 316 ntBASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 SNORA76.2-201ENST00000517095 137 ntBASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 HMGB1P46-201ENST00000520062 610 ntBASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 AC135001.1-201ENST00000544546 283 ntBASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 AC079148.1-201ENST00000565944 819 ntBASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 AC233266.2-201ENST00000567067 528 ntBASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 AC244505.7-201ENST00000599675 272 ntBASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 AC012603.1-201ENST00000606424 528 ntBASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 AC004775.1-201ENST00000607389 753 ntBASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 AC004825.2-201ENST00000616634 455 ntBASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 AP002799.1-201ENST00000623552 423 ntBASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 AC010329.2-201ENST00000595195 2737 ntBASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 INTS6P1-201ENST00000504674 2530 ntBASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC28BQ9BUN5 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 PHKBP1-201ENST00000450951 1951 ntBASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 AC103591.2-201ENST00000265259 766 ntBASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 RNA5SP305-201ENST00000362665 119 ntBASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 RNU6-171P-201ENST00000384354 107 ntBASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 GSTA12P-201ENST00000402398 508 ntBASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 BX510359.2-201ENST00000417920 305 ntBASIC4.29□□□□□ -1.72
CCDC28BQ9BUN5 CHEK2P5-201ENST00000423877 246 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms