Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 IGKV1OR1-1-201ENST00000613775 347 ntBASIC6.8□□□□□ -1.32
USB1Q9BQ65 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.8□□□□□ -1.32
USB1Q9BQ65 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC6.8□□□□□ -1.32
USB1Q9BQ65 AC103705.1-201ENST00000619013 241 ntBASIC6.8□□□□□ -1.32
USB1Q9BQ65 AL357559.1-201ENST00000622228 274 ntBASIC6.8□□□□□ -1.32
USB1Q9BQ65 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC6.8□□□□□ -1.32
USB1Q9BQ65 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
USB1Q9BQ65 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
USB1Q9BQ65 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.8□□□□□ -1.32
USB1Q9BQ65 EEF1A1P3-201ENST00000417549 1385 ntBASIC6.8□□□□□ -1.32
USB1Q9BQ65 AL357556.1-201ENST00000421884 1388 ntBASIC6.8□□□□□ -1.32
USB1Q9BQ65 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC6.8□□□□□ -1.32
USB1Q9BQ65 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
USB1Q9BQ65 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
USB1Q9BQ65 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.8□□□□□ -1.32
USB1Q9BQ65 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
USB1Q9BQ65 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC6.8□□□□□ -1.32
USB1Q9BQ65 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
USB1Q9BQ65 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
USB1Q9BQ65 AC107081.3-201ENST00000612715 2034 ntBASIC6.79□□□□□ -1.32
USB1Q9BQ65 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
USB1Q9BQ65 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
USB1Q9BQ65 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
USB1Q9BQ65 AC015871.3-201ENST00000618835 2261 ntBASIC6.79□□□□□ -1.32
USB1Q9BQ65 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
USB1Q9BQ65 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
USB1Q9BQ65 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
USB1Q9BQ65 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
USB1Q9BQ65 OAS2-207ENST00000620097 2908 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
USB1Q9BQ65 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
USB1Q9BQ65 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
USB1Q9BQ65 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
USB1Q9BQ65 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
USB1Q9BQ65 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
USB1Q9BQ65 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC6.79□□□□□ -1.32
USB1Q9BQ65 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
USB1Q9BQ65 Y_RNA.473-201ENST00000384333 102 ntBASIC6.79□□□□□ -1.32
USB1Q9BQ65 Y_RNA.485-201ENST00000384395 102 ntBASIC6.79□□□□□ -1.32
USB1Q9BQ65 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC6.79□□□□□ -1.32
USB1Q9BQ65 MTCO2P33-201ENST00000402100 465 ntBASIC6.79□□□□□ -1.32
USB1Q9BQ65 MIR1231-201ENST00000408101 92 ntBASIC6.79□□□□□ -1.32
USB1Q9BQ65 Y_RNA.594-201ENST00000410373 140 ntBASIC6.79□□□□□ -1.32
USB1Q9BQ65 AL590682.1-201ENST00000437248 344 ntBASIC6.79□□□□□ -1.32
USB1Q9BQ65 AC108039.2-201ENST00000440214 359 ntBASIC6.79□□□□□ -1.32
USB1Q9BQ65 RPL21P89-201ENST00000444021 467 ntBASIC6.79□□□□□ -1.32
USB1Q9BQ65 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.79□□□□□ -1.32
USB1Q9BQ65 AL139135.2-201ENST00000445040 433 ntBASIC6.79□□□□□ -1.32
USB1Q9BQ65 HMGB3P30-201ENST00000457863 606 ntBASIC6.79□□□□□ -1.32
USB1Q9BQ65 RPL21P93-201ENST00000480465 489 ntBASIC6.79□□□□□ -1.32
USB1Q9BQ65 AC021382.1-201ENST00000483523 359 ntBASIC6.79□□□□□ -1.32
USB1Q9BQ65 AC097263.1-201ENST00000496795 606 ntBASIC6.79□□□□□ -1.32
USB1Q9BQ65 HIGD1AP13-201ENST00000509878 289 ntBASIC6.79□□□□□ -1.32
USB1Q9BQ65 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC6.79□□□□□ -1.32
USB1Q9BQ65 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.79□□□□□ -1.32
USB1Q9BQ65 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC6.79□□□□□ -1.32
USB1Q9BQ65 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC6.79□□□□□ -1.32
USB1Q9BQ65 AC089984.3-201ENST00000552838 363 ntBASIC6.79□□□□□ -1.32
USB1Q9BQ65 DNM1P31-201ENST00000564149 696 ntBASIC6.79□□□□□ -1.32
USB1Q9BQ65 MIR5705-201ENST00000579870 89 ntBASIC6.79□□□□□ -1.32
USB1Q9BQ65 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.79□□□□□ -1.32
USB1Q9BQ65 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
USB1Q9BQ65 RPS11-202ENST00000594493 575 ntTSL 3 BASIC6.79□□□□□ -1.32
USB1Q9BQ65 RPS27AP19-201ENST00000597285 458 ntBASIC6.79□□□□□ -1.32
USB1Q9BQ65 EIF3FP1-201ENST00000613970 806 ntBASIC6.79□□□□□ -1.32
USB1Q9BQ65 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.79□□□□□ -1.32
USB1Q9BQ65 CYP3A51P-201ENST00000633513 256 ntBASIC6.79□□□□□ -1.32
USB1Q9BQ65 SPRR5-201ENST00000636302 817 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
USB1Q9BQ65 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC6.79□□□□□ -1.32
USB1Q9BQ65 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
USB1Q9BQ65 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
USB1Q9BQ65 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
USB1Q9BQ65 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.79□□□□□ -1.32
USB1Q9BQ65 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
USB1Q9BQ65 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
USB1Q9BQ65 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
USB1Q9BQ65 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
USB1Q9BQ65 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
USB1Q9BQ65 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
USB1Q9BQ65 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC6.79□□□□□ -1.32
USB1Q9BQ65 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.79□□□□□ -1.32
USB1Q9BQ65 OR7E11P-202ENST00000642027 1491 ntBASIC6.79□□□□□ -1.32
USB1Q9BQ65 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
USB1Q9BQ65 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
USB1Q9BQ65 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
USB1Q9BQ65 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC6.78□□□□□ -1.32
USB1Q9BQ65 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
USB1Q9BQ65 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC6.78□□□□□ -1.32
USB1Q9BQ65 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
USB1Q9BQ65 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
USB1Q9BQ65 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC6.78□□□□□ -1.32
USB1Q9BQ65 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC6.78□□□□□ -1.32
USB1Q9BQ65 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
USB1Q9BQ65 CORIN-207ENST00000505909 3018 ntTSL 5 BASIC6.78□□□□□ -1.32
USB1Q9BQ65 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
USB1Q9BQ65 AC010615.1-201ENST00000594254 1764 ntBASIC6.78□□□□□ -1.32
USB1Q9BQ65 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
USB1Q9BQ65 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.78□□□□□ -1.32
USB1Q9BQ65 RNA5SP389-201ENST00000362610 115 ntBASIC6.78□□□□□ -1.32
USB1Q9BQ65 RNA5SP226-201ENST00000362653 115 ntBASIC6.78□□□□□ -1.32
USB1Q9BQ65 SNORA30B-201ENST00000365319 129 ntBASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms