Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.83□□□□□ -1.48
NUP88Q99567 RPS7P5-201ENST00000441482 581 ntBASIC5.83□□□□□ -1.48
NUP88Q99567 FHP1-201ENST00000442741 703 ntBASIC5.83□□□□□ -1.48
NUP88Q99567 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.83□□□□□ -1.48
NUP88Q99567 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.83□□□□□ -1.48
NUP88Q99567 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.83□□□□□ -1.48
NUP88Q99567 AC021660.1-201ENST00000465006 554 ntBASIC5.83□□□□□ -1.48
NUP88Q99567 AC011037.1-201ENST00000483964 558 ntBASIC5.83□□□□□ -1.48
NUP88Q99567 AC008897.1-201ENST00000494006 347 ntBASIC5.83□□□□□ -1.48
NUP88Q99567 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.83□□□□□ -1.48
NUP88Q99567 AC098799.3-201ENST00000506095 438 ntBASIC5.83□□□□□ -1.48
NUP88Q99567 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.83□□□□□ -1.48
NUP88Q99567 BNIP3P1-201ENST00000547295 580 ntBASIC5.83□□□□□ -1.48
NUP88Q99567 EDDM3DP-201ENST00000554692 434 ntBASIC5.83□□□□□ -1.48
NUP88Q99567 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.83□□□□□ -1.48
NUP88Q99567 AC015688.2-201ENST00000584523 262 ntBASIC5.83□□□□□ -1.48
NUP88Q99567 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.83□□□□□ -1.48
NUP88Q99567 VN1R83P-201ENST00000595685 445 ntBASIC5.83□□□□□ -1.48
NUP88Q99567 VN1R88P-201ENST00000596787 292 ntBASIC5.83□□□□□ -1.48
NUP88Q99567 AC016877.3-201ENST00000606778 504 ntBASIC5.83□□□□□ -1.48
NUP88Q99567 AC007349.4-201ENST00000608114 532 ntBASIC5.83□□□□□ -1.48
NUP88Q99567 AC120349.3-201ENST00000624377 529 ntBASIC5.83□□□□□ -1.48
NUP88Q99567 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.83□□□□□ -1.48
NUP88Q99567 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NUP88Q99567 SAMMSON-226ENST00000642089 1582 ntBASIC5.83□□□□□ -1.48
NUP88Q99567 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NUP88Q99567 AC020633.1-201ENST00000468439 2247 ntBASIC5.83□□□□□ -1.48
NUP88Q99567 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NUP88Q99567 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
NUP88Q99567 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NUP88Q99567 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
NUP88Q99567 ZNF876P-202ENST00000398732 1485 ntBASIC5.83□□□□□ -1.48
NUP88Q99567 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
NUP88Q99567 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NUP88Q99567 OR9K1P-202ENST00000641111 3217 ntBASIC5.82□□□□□ -1.48
NUP88Q99567 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.82□□□□□ -1.48
NUP88Q99567 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NUP88Q99567 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
NUP88Q99567 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.82□□□□□ -1.48
NUP88Q99567 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.82□□□□□ -1.48
NUP88Q99567 RNU4-92P-201ENST00000363783 136 ntBASIC5.82□□□□□ -1.48
NUP88Q99567 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
NUP88Q99567 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.82□□□□□ -1.48
NUP88Q99567 AL035079.1-201ENST00000405210 287 ntBASIC5.82□□□□□ -1.48
NUP88Q99567 TRGV6-201ENST00000417928 299 ntBASIC5.82□□□□□ -1.48
NUP88Q99567 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.82□□□□□ -1.48
NUP88Q99567 GAPDHP49-201ENST00000421421 961 ntBASIC5.82□□□□□ -1.48
NUP88Q99567 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.82□□□□□ -1.48
NUP88Q99567 OR5AW1P-201ENST00000426334 1006 ntBASIC5.82□□□□□ -1.48
NUP88Q99567 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.82□□□□□ -1.48
NUP88Q99567 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.82□□□□□ -1.48
NUP88Q99567 USP9YP9-201ENST00000429406 715 ntBASIC5.82□□□□□ -1.48
NUP88Q99567 AC009238.2-201ENST00000431026 355 ntBASIC5.82□□□□□ -1.48
NUP88Q99567 RPL21P110-201ENST00000433345 446 ntBASIC5.82□□□□□ -1.48
NUP88Q99567 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.82□□□□□ -1.48
NUP88Q99567 Z77249.1-201ENST00000444622 1175 ntBASIC5.82□□□□□ -1.48
NUP88Q99567 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.82□□□□□ -1.48
NUP88Q99567 BX842559.2-201ENST00000451418 605 ntBASIC5.82□□□□□ -1.48
NUP88Q99567 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.82□□□□□ -1.48
NUP88Q99567 BX248409.1-201ENST00000455497 255 ntBASIC5.82□□□□□ -1.48
NUP88Q99567 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.82□□□□□ -1.48
NUP88Q99567 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NUP88Q99567 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NUP88Q99567 AC023632.1-201ENST00000518463 375 ntBASIC5.82□□□□□ -1.48
NUP88Q99567 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.82□□□□□ -1.48
NUP88Q99567 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.82□□□□□ -1.48
NUP88Q99567 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.82□□□□□ -1.48
NUP88Q99567 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.82□□□□□ -1.48
NUP88Q99567 CR383656.6-201ENST00000550518 394 ntBASIC5.82□□□□□ -1.48
NUP88Q99567 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.82□□□□□ -1.48
NUP88Q99567 SULT1C2P2-201ENST00000562517 294 ntBASIC5.82□□□□□ -1.48
NUP88Q99567 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NUP88Q99567 AC022884.2-201ENST00000578535 580 ntBASIC5.82□□□□□ -1.48
NUP88Q99567 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.82□□□□□ -1.48
NUP88Q99567 AC069366.1-201ENST00000583159 838 ntBASIC5.82□□□□□ -1.48
NUP88Q99567 MIR4737-201ENST00000583979 81 ntBASIC5.82□□□□□ -1.48
NUP88Q99567 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.82□□□□□ -1.48
NUP88Q99567 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.82□□□□□ -1.48
NUP88Q99567 AC104785.1-201ENST00000603220 588 ntBASIC5.82□□□□□ -1.48
NUP88Q99567 AC025811.1-201ENST00000604312 472 ntBASIC5.82□□□□□ -1.48
NUP88Q99567 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.82□□□□□ -1.48
NUP88Q99567 AC099676.1-201ENST00000608886 657 ntBASIC5.82□□□□□ -1.48
NUP88Q99567 AC004908.3-201ENST00000610248 625 ntBASIC5.82□□□□□ -1.48
NUP88Q99567 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.82□□□□□ -1.48
NUP88Q99567 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.82□□□□□ -1.48
NUP88Q99567 AC138965.3-201ENST00000623875 498 ntBASIC5.82□□□□□ -1.48
NUP88Q99567 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.82□□□□□ -1.48
NUP88Q99567 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.82□□□□□ -1.48
NUP88Q99567 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NUP88Q99567 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.82□□□□□ -1.48
NUP88Q99567 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.82□□□□□ -1.48
NUP88Q99567 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
NUP88Q99567 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
NUP88Q99567 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
NUP88Q99567 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
NUP88Q99567 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NUP88Q99567 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.82□□□□□ -1.48
NUP88Q99567 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.82□□□□□ -1.48
NUP88Q99567 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.82□□□□□ -1.48
NUP88Q99567 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 146.4 ms