Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AL034403.1-201ENST00000399414 885 ntBASIC4.07□□□□□ -1.76
COL21A1Q96P44 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.07□□□□□ -1.76
COL21A1Q96P44 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.07□□□□□ -1.76
COL21A1Q96P44 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.07□□□□□ -1.76
COL21A1Q96P44 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.07□□□□□ -1.76
COL21A1Q96P44 TPT1P13-201ENST00000449760 499 ntBASIC4.07□□□□□ -1.76
COL21A1Q96P44 ABCF2P2-201ENST00000450549 296 ntBASIC4.07□□□□□ -1.76
COL21A1Q96P44 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.07□□□□□ -1.76
COL21A1Q96P44 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.07□□□□□ -1.76
COL21A1Q96P44 AC037198.2-201ENST00000478845 733 ntBASIC4.07□□□□□ -1.76
COL21A1Q96P44 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.07□□□□□ -1.76
COL21A1Q96P44 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.07□□□□□ -1.76
COL21A1Q96P44 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.07□□□□□ -1.76
COL21A1Q96P44 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.07□□□□□ -1.76
COL21A1Q96P44 SEC11B-201ENST00000518383 499 ntBASIC4.07□□□□□ -1.76
COL21A1Q96P44 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.07□□□□□ -1.76
COL21A1Q96P44 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.07□□□□□ -1.76
COL21A1Q96P44 AC084033.1-201ENST00000550830 633 ntBASIC4.07□□□□□ -1.76
COL21A1Q96P44 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COL21A1Q96P44 AC068790.4-201ENST00000602474 263 ntBASIC4.07□□□□□ -1.76
COL21A1Q96P44 AC079587.1-201ENST00000603846 277 ntBASIC4.07□□□□□ -1.76
COL21A1Q96P44 AC090948.1-201ENST00000607464 549 ntBASIC4.07□□□□□ -1.76
COL21A1Q96P44 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.07□□□□□ -1.76
COL21A1Q96P44 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.07□□□□□ -1.76
COL21A1Q96P44 RMST_5.1-201ENST00000618704 126 ntBASIC4.07□□□□□ -1.76
COL21A1Q96P44 AL356121.2-201ENST00000624715 780 ntBASIC4.07□□□□□ -1.76
COL21A1Q96P44 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL21A1Q96P44 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
COL21A1Q96P44 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
COL21A1Q96P44 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COL21A1Q96P44 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COL21A1Q96P44 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL21A1Q96P44 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.06□□□□□ -1.76
COL21A1Q96P44 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.06□□□□□ -1.76
COL21A1Q96P44 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
COL21A1Q96P44 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.06□□□□□ -1.76
COL21A1Q96P44 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL21A1Q96P44 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.06□□□□□ -1.76
COL21A1Q96P44 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
COL21A1Q96P44 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
COL21A1Q96P44 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.06□□□□□ -1.76
COL21A1Q96P44 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.06□□□□□ -1.76
COL21A1Q96P44 OR5P1P-201ENST00000299512 925 ntBASIC4.06□□□□□ -1.76
COL21A1Q96P44 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
COL21A1Q96P44 IGKV7-3-201ENST00000357453 298 ntBASIC4.06□□□□□ -1.76
COL21A1Q96P44 RPL23AP59-201ENST00000399415 461 ntBASIC4.06□□□□□ -1.76
COL21A1Q96P44 ELOCP19-201ENST00000411919 318 ntBASIC4.06□□□□□ -1.76
COL21A1Q96P44 JKAMPP1-201ENST00000413804 919 ntBASIC4.06□□□□□ -1.76
COL21A1Q96P44 AC009302.1-201ENST00000417147 390 ntBASIC4.06□□□□□ -1.76
COL21A1Q96P44 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.06□□□□□ -1.76
COL21A1Q96P44 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.06□□□□□ -1.76
COL21A1Q96P44 YWHAEP5-201ENST00000431545 765 ntBASIC4.06□□□□□ -1.76
COL21A1Q96P44 FTH1P16-201ENST00000435241 552 ntBASIC4.06□□□□□ -1.76
COL21A1Q96P44 AC114495.1-201ENST00000441274 436 ntBASIC4.06□□□□□ -1.76
COL21A1Q96P44 PHBP16-201ENST00000446318 950 ntBASIC4.06□□□□□ -1.76
COL21A1Q96P44 CYCSP42-201ENST00000450823 238 ntBASIC4.06□□□□□ -1.76
COL21A1Q96P44 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.06□□□□□ -1.76
COL21A1Q96P44 C1DP3-201ENST00000455013 423 ntBASIC4.06□□□□□ -1.76
COL21A1Q96P44 DHFRP3-201ENST00000455595 559 ntBASIC4.06□□□□□ -1.76
COL21A1Q96P44 LARP7P4-201ENST00000481075 878 ntBASIC4.06□□□□□ -1.76
COL21A1Q96P44 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.06□□□□□ -1.76
COL21A1Q96P44 AC013356.1-201ENST00000489027 564 ntBASIC4.06□□□□□ -1.76
COL21A1Q96P44 RN7SL810P-201ENST00000493031 276 ntBASIC4.06□□□□□ -1.76
COL21A1Q96P44 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.06□□□□□ -1.76
COL21A1Q96P44 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.06□□□□□ -1.76
COL21A1Q96P44 ATP1B1P1-201ENST00000509767 915 ntBASIC4.06□□□□□ -1.76
COL21A1Q96P44 MTCYBP19-201ENST00000517463 1124 ntBASIC4.06□□□□□ -1.76
COL21A1Q96P44 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.06□□□□□ -1.76
COL21A1Q96P44 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.06□□□□□ -1.76
COL21A1Q96P44 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.06□□□□□ -1.76
COL21A1Q96P44 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.06□□□□□ -1.76
COL21A1Q96P44 AL352979.3-201ENST00000553515 247 ntBASIC4.06□□□□□ -1.76
COL21A1Q96P44 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
COL21A1Q96P44 AL356218.2-201ENST00000605264 187 ntBASIC4.06□□□□□ -1.76
COL21A1Q96P44 AC034236.3-201ENST00000605999 461 ntBASIC4.06□□□□□ -1.76
COL21A1Q96P44 MIR432-201ENST00000606207 94 ntBASIC4.06□□□□□ -1.76
COL21A1Q96P44 MIR378J-201ENST00000611988 109 ntBASIC4.06□□□□□ -1.76
COL21A1Q96P44 AC107905.1-201ENST00000616204 426 ntBASIC4.06□□□□□ -1.76
COL21A1Q96P44 AC233309.1-201ENST00000619522 751 ntBASIC4.06□□□□□ -1.76
COL21A1Q96P44 AC103858.2-201ENST00000621471 543 ntBASIC4.06□□□□□ -1.76
COL21A1Q96P44 AC019278.1-201ENST00000623516 479 ntBASIC4.06□□□□□ -1.76
COL21A1Q96P44 AC139713.2-214ENST00000642059 1811 ntBASIC4.06□□□□□ -1.76
COL21A1Q96P44 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.06□□□□□ -1.76
COL21A1Q96P44 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL21A1Q96P44 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.06□□□□□ -1.76
COL21A1Q96P44 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.06□□□□□ -1.76
COL21A1Q96P44 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL21A1Q96P44 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL21A1Q96P44 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.06□□□□□ -1.76
COL21A1Q96P44 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL21A1Q96P44 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
COL21A1Q96P44 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
COL21A1Q96P44 CASC19-284ENST00000642142 1868 ntBASIC4.05□□□□□ -1.76
COL21A1Q96P44 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.05□□□□□ -1.76
COL21A1Q96P44 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
COL21A1Q96P44 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.05□□□□□ -1.76
COL21A1Q96P44 AC008033.1-201ENST00000216407 1162 ntBASIC4.05□□□□□ -1.76
COL21A1Q96P44 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
COL21A1Q96P44 RNA5SP388-201ENST00000362584 119 ntBASIC4.05□□□□□ -1.76
COL21A1Q96P44 RNU1-32P-201ENST00000363937 159 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms