Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
C9orf72Q96LT7 AL137246.1-201ENST00000607072 977 ntBASIC4.38□□□□□ -1.71
C9orf72Q96LT7 AC064801.1-201ENST00000612025 407 ntBASIC4.38□□□□□ -1.71
C9orf72Q96LT7 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.38□□□□□ -1.71
C9orf72Q96LT7 MIR6830-201ENST00000636015 70 ntBASIC4.38□□□□□ -1.71
C9orf72Q96LT7 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.38□□□□□ -1.71
C9orf72Q96LT7 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
C9orf72Q96LT7 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
C9orf72Q96LT7 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
C9orf72Q96LT7 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
C9orf72Q96LT7 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
C9orf72Q96LT7 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
C9orf72Q96LT7 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
C9orf72Q96LT7 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
C9orf72Q96LT7 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
C9orf72Q96LT7 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
C9orf72Q96LT7 RNA5SP509-201ENST00000364577 119 ntBASIC4.37□□□□□ -1.71
C9orf72Q96LT7 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.37□□□□□ -1.71
C9orf72Q96LT7 AC093719.1-202ENST00000392735 373 ntBASIC4.37□□□□□ -1.71
C9orf72Q96LT7 RPL23AP59-201ENST00000399415 461 ntBASIC4.37□□□□□ -1.71
C9orf72Q96LT7 RNA5SP306-201ENST00000411087 107 ntBASIC4.37□□□□□ -1.71
C9orf72Q96LT7 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.37□□□□□ -1.71
C9orf72Q96LT7 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.37□□□□□ -1.71
C9orf72Q96LT7 RBMY1KP-201ENST00000423480 476 ntBASIC4.37□□□□□ -1.71
C9orf72Q96LT7 AC093084.1-201ENST00000424233 687 ntBASIC4.37□□□□□ -1.71
C9orf72Q96LT7 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
C9orf72Q96LT7 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.37□□□□□ -1.71
C9orf72Q96LT7 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.37□□□□□ -1.71
C9orf72Q96LT7 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.37□□□□□ -1.71
C9orf72Q96LT7 CCDC75P1-201ENST00000469247 791 ntBASIC4.37□□□□□ -1.71
C9orf72Q96LT7 AC022336.1-201ENST00000475510 337 ntBASIC4.37□□□□□ -1.71
C9orf72Q96LT7 RN7SL812P-201ENST00000493791 279 ntBASIC4.37□□□□□ -1.71
C9orf72Q96LT7 AC083829.1-201ENST00000503756 657 ntBASIC4.37□□□□□ -1.71
C9orf72Q96LT7 AC139783.2-201ENST00000504847 1145 ntBASIC4.37□□□□□ -1.71
C9orf72Q96LT7 HNRNPKP5-201ENST00000515300 253 ntBASIC4.37□□□□□ -1.71
C9orf72Q96LT7 IGLVIV-65-201ENST00000517313 360 ntBASIC4.37□□□□□ -1.71
C9orf72Q96LT7 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.37□□□□□ -1.71
C9orf72Q96LT7 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.37□□□□□ -1.71
C9orf72Q96LT7 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.37□□□□□ -1.71
C9orf72Q96LT7 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.37□□□□□ -1.71
C9orf72Q96LT7 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
C9orf72Q96LT7 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.37□□□□□ -1.71
C9orf72Q96LT7 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.37□□□□□ -1.71
C9orf72Q96LT7 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.37□□□□□ -1.71
C9orf72Q96LT7 AP001160.4-201ENST00000596971 382 ntBASIC4.37□□□□□ -1.71
C9orf72Q96LT7 AC079587.1-201ENST00000603846 277 ntBASIC4.37□□□□□ -1.71
C9orf72Q96LT7 AL354984.3-201ENST00000604803 325 ntBASIC4.37□□□□□ -1.71
C9orf72Q96LT7 AC012557.1-201ENST00000607115 611 ntBASIC4.37□□□□□ -1.71
C9orf72Q96LT7 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.37□□□□□ -1.71
C9orf72Q96LT7 AC005962.2-201ENST00000611427 652 ntBASIC4.37□□□□□ -1.71
C9orf72Q96LT7 AL121890.3-201ENST00000618494 516 ntBASIC4.37□□□□□ -1.71
C9orf72Q96LT7 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.37□□□□□ -1.71
C9orf72Q96LT7 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.37□□□□□ -1.71
C9orf72Q96LT7 AC008785.1-201ENST00000624475 456 ntBASIC4.37□□□□□ -1.71
C9orf72Q96LT7 OR10AB1P-202ENST00000641219 1686 ntBASIC4.37□□□□□ -1.71
C9orf72Q96LT7 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.37□□□□□ -1.71
C9orf72Q96LT7 AC006971.1-201ENST00000407916 4486 ntBASIC4.37□□□□□ -1.71
C9orf72Q96LT7 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
C9orf72Q96LT7 MTND4P26-201ENST00000415971 1359 ntBASIC4.37□□□□□ -1.71
C9orf72Q96LT7 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.37□□□□□ -1.71
C9orf72Q96LT7 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
C9orf72Q96LT7 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.37□□□□□ -1.71
C9orf72Q96LT7 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
C9orf72Q96LT7 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
C9orf72Q96LT7 MFSD8-242ENST00000641690 4199 ntBASIC4.36□□□□□ -1.71
C9orf72Q96LT7 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
C9orf72Q96LT7 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
C9orf72Q96LT7 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.36□□□□□ -1.71
C9orf72Q96LT7 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
C9orf72Q96LT7 RNU6-984P-201ENST00000363236 109 ntBASIC4.36□□□□□ -1.71
C9orf72Q96LT7 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
C9orf72Q96LT7 HSPD1P16-201ENST00000402302 394 ntBASIC4.36□□□□□ -1.71
C9orf72Q96LT7 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.36□□□□□ -1.71
C9orf72Q96LT7 CASP3P1-201ENST00000446037 609 ntBASIC4.36□□□□□ -1.71
C9orf72Q96LT7 FGF7P3-201ENST00000454645 303 ntBASIC4.36□□□□□ -1.71
C9orf72Q96LT7 AC133473.1-201ENST00000455173 299 ntBASIC4.36□□□□□ -1.71
C9orf72Q96LT7 SEPT14P1-201ENST00000458703 648 ntBASIC4.36□□□□□ -1.71
C9orf72Q96LT7 AC053481.1-201ENST00000467217 306 ntBASIC4.36□□□□□ -1.71
C9orf72Q96LT7 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.36□□□□□ -1.71
C9orf72Q96LT7 AC006517.1-201ENST00000480485 328 ntBASIC4.36□□□□□ -1.71
C9orf72Q96LT7 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.36□□□□□ -1.71
C9orf72Q96LT7 IGHV3-63-201ENST00000518422 341 ntBASIC4.36□□□□□ -1.71
C9orf72Q96LT7 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.36□□□□□ -1.71
C9orf72Q96LT7 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.36□□□□□ -1.71
C9orf72Q96LT7 AL109766.1-201ENST00000555080 552 ntBASIC4.36□□□□□ -1.71
C9orf72Q96LT7 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.36□□□□□ -1.71
C9orf72Q96LT7 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
C9orf72Q96LT7 SNX6P1-201ENST00000601728 1224 ntBASIC4.36□□□□□ -1.71
C9orf72Q96LT7 AL590392.1-201ENST00000604960 446 ntBASIC4.36□□□□□ -1.71
C9orf72Q96LT7 AL021997.2-201ENST00000615674 271 ntBASIC4.36□□□□□ -1.71
C9orf72Q96LT7 AC011944.2-201ENST00000624440 683 ntBASIC4.36□□□□□ -1.71
C9orf72Q96LT7 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.36□□□□□ -1.71
C9orf72Q96LT7 AC010300.1-201ENST00000600671 5134 ntBASIC4.36□□□□□ -1.71
C9orf72Q96LT7 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
C9orf72Q96LT7 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
C9orf72Q96LT7 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.36□□□□□ -1.71
C9orf72Q96LT7 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.36□□□□□ -1.71
C9orf72Q96LT7 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
C9orf72Q96LT7 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
C9orf72Q96LT7 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms