Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AL355377.1-201ENST00000621125 1653 ntBASIC7.54□□□□□ -1.2
LRCH3Q96II8 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC7.54□□□□□ -1.2
LRCH3Q96II8 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
LRCH3Q96II8 AC004972.1-201ENST00000623934 2209 ntBASIC7.54□□□□□ -1.2
LRCH3Q96II8 API5-210ENST00000534600 1760 ntTSL 5 BASIC7.54□□□□□ -1.2
LRCH3Q96II8 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LRCH3Q96II8 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
LRCH3Q96II8 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
LRCH3Q96II8 AP003471.1-202ENST00000319051 1988 ntBASIC7.53□□□□□ -1.2
LRCH3Q96II8 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LRCH3Q96II8 ALB-219ENST00000621085 1418 ntTSL 5 BASIC7.53□□□□□ -1.2
LRCH3Q96II8 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.53□□□□□ -1.2
LRCH3Q96II8 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
LRCH3Q96II8 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC7.53□□□□□ -1.2
LRCH3Q96II8 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
LRCH3Q96II8 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LRCH3Q96II8 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC7.53□□□□□ -1.2
LRCH3Q96II8 MIR323A-201ENST00000362199 86 ntBASIC7.53□□□□□ -1.2
LRCH3Q96II8 SNORA58B-201ENST00000364259 136 ntBASIC7.53□□□□□ -1.2
LRCH3Q96II8 RNU6-115P-201ENST00000364310 107 ntBASIC7.53□□□□□ -1.2
LRCH3Q96II8 SNORA20.1-201ENST00000364790 130 ntBASIC7.53□□□□□ -1.2
LRCH3Q96II8 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
LRCH3Q96II8 RNU6-432P-201ENST00000384196 109 ntBASIC7.53□□□□□ -1.2
LRCH3Q96II8 AL606923.1-201ENST00000406616 190 ntBASIC7.53□□□□□ -1.2
LRCH3Q96II8 RPS6P23-201ENST00000413224 722 ntBASIC7.53□□□□□ -1.2
LRCH3Q96II8 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC7.53□□□□□ -1.2
LRCH3Q96II8 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC7.53□□□□□ -1.2
LRCH3Q96II8 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC7.53□□□□□ -1.2
LRCH3Q96II8 CEP57L1P1-201ENST00000430943 1201 ntBASIC7.53□□□□□ -1.2
LRCH3Q96II8 AC005019.1-201ENST00000436455 431 ntBASIC7.53□□□□□ -1.2
LRCH3Q96II8 MYL6P3-201ENST00000436904 432 ntBASIC7.53□□□□□ -1.2
LRCH3Q96II8 DYNLT3P2-201ENST00000442517 295 ntBASIC7.53□□□□□ -1.2
LRCH3Q96II8 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.53□□□□□ -1.2
LRCH3Q96II8 RPS27AP15-201ENST00000447672 466 ntBASIC7.53□□□□□ -1.2
LRCH3Q96II8 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC7.53□□□□□ -1.2
LRCH3Q96II8 NXT1P1-201ENST00000458481 316 ntBASIC7.53□□□□□ -1.2
LRCH3Q96II8 RPL5P22-201ENST00000480199 884 ntBASIC7.53□□□□□ -1.2
LRCH3Q96II8 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC7.53□□□□□ -1.2
LRCH3Q96II8 AC116655.1-201ENST00000508324 901 ntBASIC7.53□□□□□ -1.2
LRCH3Q96II8 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC7.53□□□□□ -1.2
LRCH3Q96II8 AC012400.1-201ENST00000518452 381 ntBASIC7.53□□□□□ -1.2
LRCH3Q96II8 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC7.53□□□□□ -1.2
LRCH3Q96II8 GNAI2P1-201ENST00000541815 315 ntBASIC7.53□□□□□ -1.2
LRCH3Q96II8 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC7.53□□□□□ -1.2
LRCH3Q96II8 AL118558.2-201ENST00000556294 238 ntBASIC7.53□□□□□ -1.2
LRCH3Q96II8 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC7.53□□□□□ -1.2
LRCH3Q96II8 MIR548AI-201ENST00000579940 88 ntBASIC7.53□□□□□ -1.2
LRCH3Q96II8 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC7.53□□□□□ -1.2
LRCH3Q96II8 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.53□□□□□ -1.2
LRCH3Q96II8 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.53□□□□□ -1.2
LRCH3Q96II8 MIR6128-201ENST00000615528 109 ntBASIC7.53□□□□□ -1.2
LRCH3Q96II8 AC092608.2-201ENST00000624427 218 ntBASIC7.53□□□□□ -1.2
LRCH3Q96II8 AL512643.1-201ENST00000635735 524 ntBASIC7.53□□□□□ -1.2
LRCH3Q96II8 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC7.53□□□□□ -1.2
LRCH3Q96II8 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
LRCH3Q96II8 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
LRCH3Q96II8 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LRCH3Q96II8 RNF6P1-201ENST00000444889 1784 ntBASIC7.53□□□□□ -1.2
LRCH3Q96II8 AL359922.2-201ENST00000581788 3017 ntBASIC7.53□□□□□ -1.2
LRCH3Q96II8 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
LRCH3Q96II8 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
LRCH3Q96II8 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LRCH3Q96II8 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LRCH3Q96II8 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC7.53□□□□□ -1.2
LRCH3Q96II8 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
LRCH3Q96II8 SAMMSON-213ENST00000641336 1521 ntBASIC7.52□□□□□ -1.2
LRCH3Q96II8 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC7.52□□□□□ -1.2
LRCH3Q96II8 AC008937.3-201ENST00000606813 1700 ntBASIC7.52□□□□□ -1.2
LRCH3Q96II8 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.2
LRCH3Q96II8 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC7.52□□□□□ -1.2
LRCH3Q96II8 NRG3-206ENST00000545131 2713 ntTSL 5 BASIC7.52□□□□□ -1.21
LRCH3Q96II8 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC7.52□□□□□ -1.21
LRCH3Q96II8 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC7.52□□□□□ -1.21
LRCH3Q96II8 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
LRCH3Q96II8 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
LRCH3Q96II8 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
LRCH3Q96II8 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
LRCH3Q96II8 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
LRCH3Q96II8 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC7.52□□□□□ -1.21
LRCH3Q96II8 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
LRCH3Q96II8 ARHGAP42P1-201ENST00000507474 1976 ntBASIC7.52□□□□□ -1.21
LRCH3Q96II8 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC7.52□□□□□ -1.21
LRCH3Q96II8 AC046144.1-201ENST00000478559 1853 ntBASIC7.52□□□□□ -1.21
LRCH3Q96II8 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
LRCH3Q96II8 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
LRCH3Q96II8 KPNA2P1-201ENST00000458289 1591 ntBASIC7.52□□□□□ -1.21
LRCH3Q96II8 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC7.52□□□□□ -1.21
LRCH3Q96II8 MFSD8-218ENST00000641186 4448 ntBASIC7.52□□□□□ -1.21
LRCH3Q96II8 Y_RNA.461-201ENST00000384263 103 ntBASIC7.52□□□□□ -1.21
LRCH3Q96II8 Y_RNA.493-201ENST00000384422 102 ntBASIC7.52□□□□□ -1.21
LRCH3Q96II8 RNU6-101P-201ENST00000410323 104 ntBASIC7.52□□□□□ -1.21
LRCH3Q96II8 AL035422.1-201ENST00000414193 397 ntBASIC7.52□□□□□ -1.21
LRCH3Q96II8 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC7.52□□□□□ -1.21
LRCH3Q96II8 EIF4EP1-201ENST00000422311 642 ntBASIC7.52□□□□□ -1.21
LRCH3Q96II8 RPS17P8-201ENST00000434525 335 ntBASIC7.52□□□□□ -1.21
LRCH3Q96II8 TUBB4BP6-201ENST00000437576 479 ntBASIC7.52□□□□□ -1.21
LRCH3Q96II8 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC7.52□□□□□ -1.21
LRCH3Q96II8 RPL5P7-201ENST00000444235 813 ntBASIC7.52□□□□□ -1.21
LRCH3Q96II8 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC7.52□□□□□ -1.21
LRCH3Q96II8 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms