Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC10.41□□□□□ -0.74
TRIM41Q8WV44 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
TRIM41Q8WV44 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TRIM41Q8WV44 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TRIM41Q8WV44 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
TRIM41Q8WV44 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TRIM41Q8WV44 HDAC1P2-201ENST00000453661 1398 ntBASIC10.4□□□□□ -0.74
TRIM41Q8WV44 SALL4P7-201ENST00000555779 3120 ntBASIC10.4□□□□□ -0.74
TRIM41Q8WV44 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TRIM41Q8WV44 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
TRIM41Q8WV44 CYP4Z2P-201ENST00000423332 1512 ntBASIC10.4□□□□□ -0.74
TRIM41Q8WV44 CASC19-243ENST00000641588 1546 ntBASIC10.4□□□□□ -0.74
TRIM41Q8WV44 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
TRIM41Q8WV44 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
TRIM41Q8WV44 Y_RNA.86-201ENST00000363020 111 ntBASIC10.4□□□□□ -0.74
TRIM41Q8WV44 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC10.4□□□□□ -0.74
TRIM41Q8WV44 RNU6-483P-201ENST00000384088 108 ntBASIC10.4□□□□□ -0.74
TRIM41Q8WV44 AC013442.1-201ENST00000397347 228 ntBASIC10.4□□□□□ -0.74
TRIM41Q8WV44 MIR1284-201ENST00000408337 120 ntBASIC10.4□□□□□ -0.74
TRIM41Q8WV44 RNA5SP156-201ENST00000410250 110 ntBASIC10.4□□□□□ -0.74
TRIM41Q8WV44 Y_RNA.598-201ENST00000410480 95 ntBASIC10.4□□□□□ -0.74
TRIM41Q8WV44 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TRIM41Q8WV44 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC10.4□□□□□ -0.74
TRIM41Q8WV44 AC073594.1-201ENST00000462065 364 ntBASIC10.4□□□□□ -0.74
TRIM41Q8WV44 AC091544.1-201ENST00000484702 348 ntBASIC10.4□□□□□ -0.74
TRIM41Q8WV44 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC10.4□□□□□ -0.74
TRIM41Q8WV44 AC026427.2-201ENST00000506228 536 ntBASIC10.4□□□□□ -0.74
TRIM41Q8WV44 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC10.4□□□□□ -0.74
TRIM41Q8WV44 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC10.4□□□□□ -0.74
TRIM41Q8WV44 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
TRIM41Q8WV44 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC10.4□□□□□ -0.74
TRIM41Q8WV44 COX6CP7-201ENST00000597056 208 ntBASIC10.4□□□□□ -0.74
TRIM41Q8WV44 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC10.4□□□□□ -0.74
TRIM41Q8WV44 Z95327.3-201ENST00000610385 572 ntBASIC10.4□□□□□ -0.74
TRIM41Q8WV44 AP001506.1-201ENST00000615444 211 ntBASIC10.4□□□□□ -0.74
TRIM41Q8WV44 AL137067.2-201ENST00000621202 131 ntBASIC10.4□□□□□ -0.74
TRIM41Q8WV44 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
TRIM41Q8WV44 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
TRIM41Q8WV44 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC10.4□□□□□ -0.74
TRIM41Q8WV44 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC10.4□□□□□ -0.74
TRIM41Q8WV44 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
TRIM41Q8WV44 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TRIM41Q8WV44 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC10.4□□□□□ -0.75
TRIM41Q8WV44 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
TRIM41Q8WV44 RBMY1HP-201ENST00000382759 1389 ntBASIC10.39□□□□□ -0.75
TRIM41Q8WV44 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC10.39□□□□□ -0.75
TRIM41Q8WV44 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC10.39□□□□□ -0.75
TRIM41Q8WV44 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
TRIM41Q8WV44 AC005034.3-201ENST00000604845 1747 ntBASIC10.39□□□□□ -0.75
TRIM41Q8WV44 RNU6-1263P-201ENST00000384601 106 ntBASIC10.39□□□□□ -0.75
TRIM41Q8WV44 EI24P3-201ENST00000399046 1062 ntBASIC10.39□□□□□ -0.75
TRIM41Q8WV44 RPL35AP24-201ENST00000413846 330 ntBASIC10.39□□□□□ -0.75
TRIM41Q8WV44 RPS7P8-201ENST00000418311 581 ntBASIC10.39□□□□□ -0.75
TRIM41Q8WV44 RPL7P56-201ENST00000429441 717 ntBASIC10.39□□□□□ -0.75
TRIM41Q8WV44 AC018644.1-201ENST00000429934 551 ntBASIC10.39□□□□□ -0.75
TRIM41Q8WV44 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC10.39□□□□□ -0.75
TRIM41Q8WV44 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC10.39□□□□□ -0.75
TRIM41Q8WV44 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC10.39□□□□□ -0.75
TRIM41Q8WV44 TPT1P12-201ENST00000448968 492 ntBASIC10.39□□□□□ -0.75
TRIM41Q8WV44 FABP3P2-201ENST00000453169 399 ntBASIC10.39□□□□□ -0.75
TRIM41Q8WV44 RPS29P25-201ENST00000481709 171 ntBASIC10.39□□□□□ -0.75
TRIM41Q8WV44 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC10.39□□□□□ -0.75
TRIM41Q8WV44 AC096754.1-201ENST00000508904 818 ntBASIC10.39□□□□□ -0.75
TRIM41Q8WV44 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC10.39□□□□□ -0.75
TRIM41Q8WV44 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC10.39□□□□□ -0.75
TRIM41Q8WV44 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC10.39□□□□□ -0.75
TRIM41Q8WV44 AC093012.1-202ENST00000549403 582 ntBASIC10.39□□□□□ -0.75
TRIM41Q8WV44 AC078814.3-201ENST00000553036 491 ntBASIC10.39□□□□□ -0.75
TRIM41Q8WV44 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
TRIM41Q8WV44 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC10.39□□□□□ -0.75
TRIM41Q8WV44 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC10.39□□□□□ -0.75
TRIM41Q8WV44 RNU4ATAC-201ENST00000580972 127 ntBASIC10.39□□□□□ -0.75
TRIM41Q8WV44 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC10.39□□□□□ -0.75
TRIM41Q8WV44 AC007363.1-201ENST00000604736 620 ntBASIC10.39□□□□□ -0.75
TRIM41Q8WV44 AC069304.2-201ENST00000605154 435 ntBASIC10.39□□□□□ -0.75
TRIM41Q8WV44 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC10.39□□□□□ -0.75
TRIM41Q8WV44 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
TRIM41Q8WV44 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC10.39□□□□□ -0.75
TRIM41Q8WV44 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TRIM41Q8WV44 AC016251.2-201ENST00000623393 3089 ntBASIC10.39□□□□□ -0.75
TRIM41Q8WV44 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC10.39□□□□□ -0.75
TRIM41Q8WV44 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC10.38□□□□□ -0.75
TRIM41Q8WV44 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC10.38□□□□□ -0.75
TRIM41Q8WV44 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TRIM41Q8WV44 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC10.38□□□□□ -0.75
TRIM41Q8WV44 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TRIM41Q8WV44 RNU6-543P-201ENST00000362576 108 ntBASIC10.38□□□□□ -0.75
TRIM41Q8WV44 AC025750.1-201ENST00000399891 379 ntBASIC10.38□□□□□ -0.75
TRIM41Q8WV44 AL589647.1-201ENST00000402485 466 ntBASIC10.38□□□□□ -0.75
TRIM41Q8WV44 FCF1P2-201ENST00000415284 583 ntBASIC10.38□□□□□ -0.75
TRIM41Q8WV44 RPL35AP31-201ENST00000418340 337 ntBASIC10.38□□□□□ -0.75
TRIM41Q8WV44 OR5W1P-201ENST00000423705 938 ntBASIC10.38□□□□□ -0.75
TRIM41Q8WV44 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC10.38□□□□□ -0.75
TRIM41Q8WV44 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC10.38□□□□□ -0.75
TRIM41Q8WV44 HMGB3P9-201ENST00000441799 583 ntBASIC10.38□□□□□ -0.75
TRIM41Q8WV44 MTCYBP6-201ENST00000441810 138 ntBASIC10.38□□□□□ -0.75
TRIM41Q8WV44 RN7SL481P-201ENST00000477764 299 ntBASIC10.38□□□□□ -0.75
TRIM41Q8WV44 RN7SL97P-201ENST00000486780 299 ntBASIC10.38□□□□□ -0.75
TRIM41Q8WV44 HMGN2P25-201ENST00000486956 268 ntBASIC10.38□□□□□ -0.75
TRIM41Q8WV44 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC10.38□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms