Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 AC006971.1-201ENST00000407916 4486 ntBASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 EIF2AP4-201ENST00000424793 1781 ntBASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 OR4K17-201ENST00000315543 1032 ntBASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 MIR195-201ENST00000385194 87 ntBASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 AL583835.1-201ENST00000399570 407 ntBASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 AL078604.1-201ENST00000404609 466 ntBASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 OR6K4P-201ENST00000423179 955 ntBASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 CHIAP3-201ENST00000423668 1133 ntBASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 AL390879.2-203ENST00000426943 1121 ntBASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 AC073143.1-201ENST00000436316 395 ntBASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 MTCYBP12-201ENST00000440559 1134 ntBASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 RPS27AP15-201ENST00000447672 466 ntBASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 AL353718.1-201ENST00000451028 517 ntBASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 PSMC1P13-201ENST00000458195 985 ntBASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 RN7SL812P-201ENST00000493791 279 ntBASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 CEACAMP10-202ENST00000495431 496 ntBASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 CDH12P2-201ENST00000504393 298 ntBASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 TRAV8-5-201ENST00000537369 341 ntBASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 AC023158.1-201ENST00000561632 1025 ntBASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 AL450270.1-201ENST00000606160 391 ntBASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 AC006213.5-201ENST00000619673 288 ntBASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 AC011944.2-201ENST00000624440 683 ntBASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 AC140479.6-201ENST00000633535 357 ntBASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 FP325313.1-201ENST00000638228 703 ntBASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 CCT8P1-201ENST00000413611 1657 ntBASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 KPNA2P2-201ENST00000419546 1489 ntBASIC4.05□□□□□ -1.76
C9orf40Q8IXQ3 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 OR52B1P-201ENST00000316506 909 ntBASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 SNORA11F-201ENST00000408237 128 ntBASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 AL590762.3-201ENST00000436372 640 ntBASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 AC023512.1-201ENST00000444513 499 ntBASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 RPL35AP15-201ENST00000468042 339 ntBASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 NDUFA5P9-201ENST00000472609 340 ntBASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 HPRT1P1-201ENST00000509498 657 ntBASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 RNU6-1308P-201ENST00000516817 103 ntBASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 AC090515.3-201ENST00000560431 315 ntBASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 ELOCP28-201ENST00000590044 317 ntBASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 AC092474.3-201ENST00000603022 568 ntBASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 AC005034.4-201ENST00000603612 899 ntBASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 AL354984.3-201ENST00000604803 325 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms