Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
SCN4BQ8IWT1 LINC01808-202ENST00000641680 1116 ntBASIC5.1□□□□□ -1.59
SCN4BQ8IWT1 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SCN4BQ8IWT1 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.1□□□□□ -1.59
SCN4BQ8IWT1 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SCN4BQ8IWT1 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
SCN4BQ8IWT1 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SCN4BQ8IWT1 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SCN4BQ8IWT1 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
SCN4BQ8IWT1 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SCN4BQ8IWT1 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SCN4BQ8IWT1 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 AC107027.3-201ENST00000565095 3473 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 AC010928.1-201ENST00000592477 1447 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 AC009643.2-201ENST00000603543 1448 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 SNORA56-201ENST00000383966 129 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 RNU6-178P-201ENST00000384631 104 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 RNU6-906P-201ENST00000384700 70 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 RPS16P5-201ENST00000406501 404 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 RSU1P3-201ENST00000412878 835 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 AL590139.1-201ENST00000416267 400 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 AL590609.2-201ENST00000421430 368 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 GTF2IP3-201ENST00000433887 494 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 RPL7P29-201ENST00000437151 728 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 AC005154.2-201ENST00000438110 379 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 PTGES3P1-201ENST00000439531 483 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 AC073264.2-201ENST00000448886 166 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 RPS5P7-201ENST00000456664 608 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 AC005229.2-201ENST00000456995 399 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 AL139824.2-201ENST00000458731 1095 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 AC079203.1-201ENST00000487972 404 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 RPL23AP72-201ENST00000492447 435 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 AC005912.1-201ENST00000495392 255 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 AC021146.5-201ENST00000503544 545 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 AC119751.1-201ENST00000513357 765 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 RN7SKP287-201ENST00000516546 266 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 RNU6-347P-201ENST00000516658 105 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 AC105031.1-201ENST00000518550 476 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 AP006289.1-201ENST00000538089 277 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 AC127024.5-201ENST00000580085 462 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 AC125494.3-201ENST00000602759 455 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 PSMA6P4-201ENST00000603247 718 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 AC093424.1-201ENST00000604999 338 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 AC055764.2-201ENST00000610089 670 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 uc_338.18-201ENST00000615451 175 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 AC139769.3-201ENST00000618383 175 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 AC024595.1-201ENST00000623088 387 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 AC097655.1-201ENST00000635075 318 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 OR6C71P-202ENST00000641886 1107 ntBASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
SCN4BQ8IWT1 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
SCN4BQ8IWT1 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
SCN4BQ8IWT1 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
SCN4BQ8IWT1 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SCN4BQ8IWT1 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SCN4BQ8IWT1 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SCN4BQ8IWT1 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 AC096656.1-201ENST00000623826 1364 ntBASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 ADAM5-202ENST00000399789 1942 ntBASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms