Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AL590806.1-201ENST00000415818 853 ntBASIC4.28□□□□□ -1.72
CCDC71Q8IV32 EIF4EP1-201ENST00000422311 642 ntBASIC4.28□□□□□ -1.72
CCDC71Q8IV32 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC71Q8IV32 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC71Q8IV32 AC073143.1-201ENST00000436316 395 ntBASIC4.28□□□□□ -1.72
CCDC71Q8IV32 MTCYBP12-201ENST00000440559 1134 ntBASIC4.28□□□□□ -1.72
CCDC71Q8IV32 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC71Q8IV32 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.28□□□□□ -1.72
CCDC71Q8IV32 MTND2P28-201ENST00000457540 1044 ntBASIC4.28□□□□□ -1.72
CCDC71Q8IV32 AC108729.2-201ENST00000476543 840 ntBASIC4.28□□□□□ -1.72
CCDC71Q8IV32 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.28□□□□□ -1.72
CCDC71Q8IV32 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC71Q8IV32 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC71Q8IV32 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.28□□□□□ -1.72
CCDC71Q8IV32 SCARNA22-201ENST00000503991 125 ntBASIC4.28□□□□□ -1.72
CCDC71Q8IV32 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC71Q8IV32 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC71Q8IV32 AC010468.3-201ENST00000508225 458 ntBASIC4.28□□□□□ -1.72
CCDC71Q8IV32 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC71Q8IV32 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC71Q8IV32 AC108120.2-201ENST00000512973 294 ntBASIC4.28□□□□□ -1.72
CCDC71Q8IV32 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.28□□□□□ -1.72
CCDC71Q8IV32 IGKV2D-10-201ENST00000520194 281 ntBASIC4.28□□□□□ -1.72
CCDC71Q8IV32 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC71Q8IV32 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC71Q8IV32 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC71Q8IV32 OR4R2P-201ENST00000530815 597 ntBASIC4.28□□□□□ -1.72
CCDC71Q8IV32 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC71Q8IV32 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC71Q8IV32 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC71Q8IV32 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC71Q8IV32 CR383656.14-201ENST00000551951 406 ntBASIC4.28□□□□□ -1.72
CCDC71Q8IV32 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC71Q8IV32 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC71Q8IV32 SNX18P1Y-201ENST00000616231 511 ntBASIC4.28□□□□□ -1.72
CCDC71Q8IV32 AC055839.1-201ENST00000634467 498 ntBASIC4.28□□□□□ -1.72
CCDC71Q8IV32 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.28□□□□□ -1.72
CCDC71Q8IV32 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCDC71Q8IV32 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC71Q8IV32 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC71Q8IV32 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC71Q8IV32 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
CCDC71Q8IV32 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC71Q8IV32 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC71Q8IV32 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC71Q8IV32 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC71Q8IV32 VPS35P1-201ENST00000563400 1518 ntBASIC4.27□□□□□ -1.73
CCDC71Q8IV32 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CCDC71Q8IV32 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC71Q8IV32 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC71Q8IV32 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC71Q8IV32 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC71Q8IV32 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC71Q8IV32 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CCDC71Q8IV32 RNU1-108P-201ENST00000362556 161 ntBASIC4.27□□□□□ -1.73
CCDC71Q8IV32 SNORA70.2-201ENST00000364506 135 ntBASIC4.27□□□□□ -1.73
CCDC71Q8IV32 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC71Q8IV32 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.27□□□□□ -1.73
CCDC71Q8IV32 RPL23AP1-201ENST00000428990 471 ntBASIC4.27□□□□□ -1.73
CCDC71Q8IV32 RPL21P91-201ENST00000429231 479 ntBASIC4.27□□□□□ -1.73
CCDC71Q8IV32 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC71Q8IV32 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC71Q8IV32 AL357520.1-201ENST00000441557 453 ntBASIC4.27□□□□□ -1.73
CCDC71Q8IV32 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC71Q8IV32 MTND2P6-201ENST00000455337 1030 ntBASIC4.27□□□□□ -1.73
CCDC71Q8IV32 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC71Q8IV32 AC090013.1-201ENST00000485147 480 ntBASIC4.27□□□□□ -1.73
CCDC71Q8IV32 AC013356.1-201ENST00000489027 564 ntBASIC4.27□□□□□ -1.73
CCDC71Q8IV32 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC71Q8IV32 IGBP1P5-201ENST00000507524 1000 ntBASIC4.27□□□□□ -1.73
CCDC71Q8IV32 SNORA76.2-201ENST00000517095 137 ntBASIC4.27□□□□□ -1.73
CCDC71Q8IV32 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC71Q8IV32 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC71Q8IV32 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC71Q8IV32 AC090151.1-201ENST00000520784 730 ntBASIC4.27□□□□□ -1.73
CCDC71Q8IV32 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC71Q8IV32 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.27□□□□□ -1.73
CCDC71Q8IV32 AC023158.1-201ENST00000561632 1025 ntBASIC4.27□□□□□ -1.73
CCDC71Q8IV32 AC021483.2-201ENST00000567415 758 ntBASIC4.27□□□□□ -1.73
CCDC71Q8IV32 MTND6P33-201ENST00000571794 183 ntBASIC4.27□□□□□ -1.73
CCDC71Q8IV32 RN7SL802P-201ENST00000577858 299 ntBASIC4.27□□□□□ -1.73
CCDC71Q8IV32 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC71Q8IV32 AC005014.3-201ENST00000605985 190 ntBASIC4.27□□□□□ -1.73
CCDC71Q8IV32 MIR1264-201ENST00000616374 69 ntBASIC4.27□□□□□ -1.73
CCDC71Q8IV32 AL109620.1-201ENST00000618738 1197 ntBASIC4.27□□□□□ -1.73
CCDC71Q8IV32 AL445493.3-201ENST00000619568 477 ntBASIC4.27□□□□□ -1.73
CCDC71Q8IV32 AL669942.2-201ENST00000620352 697 ntBASIC4.27□□□□□ -1.73
CCDC71Q8IV32 AC103798.2-201ENST00000624292 632 ntBASIC4.27□□□□□ -1.73
CCDC71Q8IV32 AC016717.3-201ENST00000624730 554 ntBASIC4.27□□□□□ -1.73
CCDC71Q8IV32 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC71Q8IV32 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CCDC71Q8IV32 MAPK10-303ENST00000641324 3959 ntBASIC4.27□□□□□ -1.73
CCDC71Q8IV32 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC71Q8IV32 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CCDC71Q8IV32 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC71Q8IV32 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC71Q8IV32 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CCDC71Q8IV32 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC71Q8IV32 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC71Q8IV32 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 143 ms