Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 AC097504.1-201ENST00000515103 2415 ntBASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 AC024587.1-201ENST00000505925 2157 ntBASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 MIR375-201ENST00000362103 64 ntBASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 RNU105B-201ENST00000364478 208 ntBASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 MIR1305-201ENST00000408300 86 ntBASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 AC023347.2-201ENST00000433994 462 ntBASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 EEF1A1P1-201ENST00000447052 739 ntBASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 FGF7P6-202ENST00000451282 293 ntBASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 YWHAEP1-201ENST00000453697 763 ntBASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 AC023424.2-201ENST00000493479 777 ntBASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 RN7SL284P-201ENST00000498823 275 ntBASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 AC114781.4-201ENST00000513707 639 ntBASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 AC108064.1-201ENST00000513791 460 ntBASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 RNU6-718P-201ENST00000516166 105 ntBASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 OR8Q1P-201ENST00000526467 655 ntBASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 DEFB108A-201ENST00000530110 222 ntBASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 ANP32BP3-201ENST00000559213 706 ntBASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 AC010547.6-201ENST00000571789 193 ntBASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 MIR3176-201ENST00000582210 90 ntBASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 AL133338.2-201ENST00000604292 736 ntBASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 AC103710.1-201ENST00000610003 901 ntBASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 AC131902.3-201ENST00000611767 581 ntBASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 AL359535.1-201ENST00000612100 1087 ntBASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.56□□□□□ -1.36
NPAS4Q8IUM7 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.56□□□□□ -1.36
NPAS4Q8IUM7 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NPAS4Q8IUM7 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
NPAS4Q8IUM7 SHQ1P1-201ENST00000437111 1544 ntBASIC6.56□□□□□ -1.36
NPAS4Q8IUM7 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
NPAS4Q8IUM7 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.56□□□□□ -1.36
NPAS4Q8IUM7 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
NPAS4Q8IUM7 PARP4P2-201ENST00000446672 3326 ntBASIC6.56□□□□□ -1.36
NPAS4Q8IUM7 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
NPAS4Q8IUM7 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NPAS4Q8IUM7 Y_RNA.70-201ENST00000362886 110 ntBASIC6.56□□□□□ -1.36
NPAS4Q8IUM7 Y_RNA.97-201ENST00000363094 102 ntBASIC6.56□□□□□ -1.36
NPAS4Q8IUM7 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.56□□□□□ -1.36
NPAS4Q8IUM7 RN7SKP266-201ENST00000410232 287 ntBASIC6.56□□□□□ -1.36
NPAS4Q8IUM7 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC6.56□□□□□ -1.36
NPAS4Q8IUM7 Z97055.1-201ENST00000419730 712 ntBASIC6.56□□□□□ -1.36
NPAS4Q8IUM7 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.56□□□□□ -1.36
NPAS4Q8IUM7 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC6.56□□□□□ -1.36
NPAS4Q8IUM7 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.56□□□□□ -1.36
NPAS4Q8IUM7 MTND3P21-201ENST00000433774 331 ntBASIC6.56□□□□□ -1.36
NPAS4Q8IUM7 RPL23AP74-201ENST00000437246 471 ntBASIC6.56□□□□□ -1.36
NPAS4Q8IUM7 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.56□□□□□ -1.36
NPAS4Q8IUM7 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.56□□□□□ -1.36
NPAS4Q8IUM7 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC6.56□□□□□ -1.36
NPAS4Q8IUM7 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.56□□□□□ -1.36
NPAS4Q8IUM7 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.56□□□□□ -1.36
NPAS4Q8IUM7 AC041039.1-201ENST00000485656 536 ntBASIC6.56□□□□□ -1.36
NPAS4Q8IUM7 HMGB1P36-201ENST00000487709 576 ntBASIC6.56□□□□□ -1.36
NPAS4Q8IUM7 FCF1P3-201ENST00000496394 590 ntBASIC6.56□□□□□ -1.36
NPAS4Q8IUM7 MYL12BP2-201ENST00000503948 512 ntBASIC6.56□□□□□ -1.36
NPAS4Q8IUM7 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC6.56□□□□□ -1.36
NPAS4Q8IUM7 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms