Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 RN7SKP199-201ENST00000410325 305 ntBASIC4.92□□□□□ -1.62
PRPF39Q86UA1 AC016397.1-201ENST00000412463 242 ntBASIC4.92□□□□□ -1.62
PRPF39Q86UA1 AC119751.6-201ENST00000416712 186 ntBASIC4.92□□□□□ -1.62
PRPF39Q86UA1 AL645608.4-201ENST00000423619 154 ntBASIC4.92□□□□□ -1.62
PRPF39Q86UA1 AL031736.2-201ENST00000426573 787 ntBASIC4.92□□□□□ -1.62
PRPF39Q86UA1 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.92□□□□□ -1.62
PRPF39Q86UA1 ACTR3P2-201ENST00000439585 1257 ntBASIC4.92□□□□□ -1.62
PRPF39Q86UA1 RPS7P5-201ENST00000441482 581 ntBASIC4.92□□□□□ -1.62
PRPF39Q86UA1 AL357520.1-201ENST00000441557 453 ntBASIC4.92□□□□□ -1.62
PRPF39Q86UA1 TDGF1P1-201ENST00000445734 527 ntBASIC4.92□□□□□ -1.62
PRPF39Q86UA1 AC068135.1-201ENST00000446164 246 ntBASIC4.92□□□□□ -1.62
PRPF39Q86UA1 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PRPF39Q86UA1 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PRPF39Q86UA1 AC073264.2-201ENST00000448886 166 ntBASIC4.92□□□□□ -1.62
PRPF39Q86UA1 AURKAPS2-201ENST00000454983 333 ntBASIC4.92□□□□□ -1.62
PRPF39Q86UA1 AC008379.1-201ENST00000463655 464 ntBASIC4.92□□□□□ -1.62
PRPF39Q86UA1 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.92□□□□□ -1.62
PRPF39Q86UA1 TPT1P3-201ENST00000492841 512 ntBASIC4.92□□□□□ -1.62
PRPF39Q86UA1 RN7SL558P-201ENST00000497468 299 ntBASIC4.92□□□□□ -1.62
PRPF39Q86UA1 AL035404.1-201ENST00000497982 568 ntBASIC4.92□□□□□ -1.62
PRPF39Q86UA1 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.92□□□□□ -1.62
PRPF39Q86UA1 AC016550.1-201ENST00000505348 785 ntBASIC4.92□□□□□ -1.62
PRPF39Q86UA1 OR51K1P-201ENST00000510214 950 ntBASIC4.92□□□□□ -1.62
PRPF39Q86UA1 AC083923.1-201ENST00000523708 376 ntBASIC4.92□□□□□ -1.62
PRPF39Q86UA1 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.92□□□□□ -1.62
PRPF39Q86UA1 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.92□□□□□ -1.62
PRPF39Q86UA1 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.92□□□□□ -1.62
PRPF39Q86UA1 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.92□□□□□ -1.62
PRPF39Q86UA1 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.92□□□□□ -1.62
PRPF39Q86UA1 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.92□□□□□ -1.62
PRPF39Q86UA1 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.92□□□□□ -1.62
PRPF39Q86UA1 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.92□□□□□ -1.62
PRPF39Q86UA1 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.92□□□□□ -1.62
PRPF39Q86UA1 SNORD91B-202ENST00000608459 222 ntBASIC4.92□□□□□ -1.62
PRPF39Q86UA1 AC112503.2-201ENST00000609005 552 ntBASIC4.92□□□□□ -1.62
PRPF39Q86UA1 AC092574.1-201ENST00000609771 420 ntBASIC4.92□□□□□ -1.62
PRPF39Q86UA1 AC097505.1-201ENST00000610199 565 ntBASIC4.92□□□□□ -1.62
PRPF39Q86UA1 AC006249.1-201ENST00000621223 471 ntBASIC4.92□□□□□ -1.62
PRPF39Q86UA1 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.92□□□□□ -1.62
PRPF39Q86UA1 AC080188.3-201ENST00000624842 748 ntBASIC4.92□□□□□ -1.62
PRPF39Q86UA1 CFTRP2-201ENST00000634304 199 ntBASIC4.92□□□□□ -1.62
PRPF39Q86UA1 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.92□□□□□ -1.62
PRPF39Q86UA1 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.92□□□□□ -1.62
PRPF39Q86UA1 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PRPF39Q86UA1 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PRPF39Q86UA1 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PRPF39Q86UA1 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
PRPF39Q86UA1 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
PRPF39Q86UA1 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PRPF39Q86UA1 AC010300.1-201ENST00000600671 5134 ntBASIC4.91□□□□□ -1.62
PRPF39Q86UA1 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PRPF39Q86UA1 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.91□□□□□ -1.62
PRPF39Q86UA1 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
PRPF39Q86UA1 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.91□□□□□ -1.62
PRPF39Q86UA1 AC083843.3-201ENST00000623679 2186 ntBASIC4.91□□□□□ -1.62
PRPF39Q86UA1 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PRPF39Q86UA1 AC139713.2-215ENST00000641428 5037 ntBASIC4.91□□□□□ -1.62
PRPF39Q86UA1 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.91□□□□□ -1.62
PRPF39Q86UA1 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
PRPF39Q86UA1 AC079741.1-201ENST00000321498 212 ntBASIC4.91□□□□□ -1.62
PRPF39Q86UA1 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.91□□□□□ -1.62
PRPF39Q86UA1 RNU1-83P-201ENST00000363426 164 ntBASIC4.91□□□□□ -1.62
PRPF39Q86UA1 RNU6-398P-201ENST00000384143 109 ntBASIC4.91□□□□□ -1.62
PRPF39Q86UA1 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
PRPF39Q86UA1 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
PRPF39Q86UA1 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.91□□□□□ -1.62
PRPF39Q86UA1 AP000580.1-201ENST00000404439 358 ntBASIC4.91□□□□□ -1.62
PRPF39Q86UA1 U3.35-201ENST00000408405 208 ntBASIC4.91□□□□□ -1.62
PRPF39Q86UA1 AC092745.2-202ENST00000411880 369 ntBASIC4.91□□□□□ -1.62
PRPF39Q86UA1 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.91□□□□□ -1.62
PRPF39Q86UA1 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC4.91□□□□□ -1.62
PRPF39Q86UA1 AC073310.1-201ENST00000423226 1033 ntBASIC4.91□□□□□ -1.62
PRPF39Q86UA1 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PRPF39Q86UA1 CDY14P-201ENST00000431260 1014 ntBASIC4.91□□□□□ -1.62
PRPF39Q86UA1 NRBF2P3-201ENST00000432731 865 ntBASIC4.91□□□□□ -1.62
PRPF39Q86UA1 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.91□□□□□ -1.62
PRPF39Q86UA1 CDY12P-201ENST00000440679 1015 ntBASIC4.91□□□□□ -1.62
PRPF39Q86UA1 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.91□□□□□ -1.62
PRPF39Q86UA1 CDY13P-201ENST00000445813 1015 ntBASIC4.91□□□□□ -1.62
PRPF39Q86UA1 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PRPF39Q86UA1 CDY23P-201ENST00000451661 1014 ntBASIC4.91□□□□□ -1.62
PRPF39Q86UA1 IFNWP4-201ENST00000453148 294 ntBASIC4.91□□□□□ -1.62
PRPF39Q86UA1 AL513533.1-201ENST00000453728 415 ntBASIC4.91□□□□□ -1.62
PRPF39Q86UA1 NDUFA12P1-201ENST00000455914 406 ntBASIC4.91□□□□□ -1.62
PRPF39Q86UA1 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.91□□□□□ -1.62
PRPF39Q86UA1 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
PRPF39Q86UA1 AC011037.1-201ENST00000483964 558 ntBASIC4.91□□□□□ -1.62
PRPF39Q86UA1 IGLV2-34-201ENST00000490007 283 ntBASIC4.91□□□□□ -1.62
PRPF39Q86UA1 AC011005.3-201ENST00000491624 395 ntBASIC4.91□□□□□ -1.62
PRPF39Q86UA1 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.91□□□□□ -1.62
PRPF39Q86UA1 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.91□□□□□ -1.62
PRPF39Q86UA1 RN7SKP276-201ENST00000516242 268 ntBASIC4.91□□□□□ -1.62
PRPF39Q86UA1 RN7SKP283-201ENST00000517197 270 ntBASIC4.91□□□□□ -1.62
PRPF39Q86UA1 RNU6-709P-201ENST00000517257 104 ntBASIC4.91□□□□□ -1.62
PRPF39Q86UA1 AC010306.1-201ENST00000523223 1117 ntBASIC4.91□□□□□ -1.62
PRPF39Q86UA1 OR5AN2P-201ENST00000534535 896 ntBASIC4.91□□□□□ -1.62
PRPF39Q86UA1 AP006289.1-201ENST00000538089 277 ntBASIC4.91□□□□□ -1.62
PRPF39Q86UA1 AP001880.2-201ENST00000538233 448 ntBASIC4.91□□□□□ -1.62
PRPF39Q86UA1 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.91□□□□□ -1.62
PRPF39Q86UA1 GLRXP2-201ENST00000555594 321 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 390.6 ms