Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTF1AQ7RTS3 AC004656.1-201ENST00000568479 4951 ntBASIC5.81□□□□□ -1.48
PTF1AQ7RTS3 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTF1AQ7RTS3 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
PTF1AQ7RTS3 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.81□□□□□ -1.48
PTF1AQ7RTS3 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTF1AQ7RTS3 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 MFSD8-213ENST00000641134 1327 ntBASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 RNU6-618P-201ENST00000363518 112 ntBASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 SNORA9-201ENST00000384215 133 ntBASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 HNRNPDP2-201ENST00000406475 478 ntBASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 MTND4LP13-201ENST00000425022 298 ntBASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 NPM1P26-201ENST00000426339 738 ntBASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 AC091390.3-201ENST00000426478 338 ntBASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 AL500522.2-201ENST00000448562 343 ntBASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 RPL31P53-201ENST00000457065 348 ntBASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 AC025164.1-201ENST00000496249 478 ntBASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 RNA5SP49-201ENST00000516450 115 ntBASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 MIR4286-201ENST00000580651 93 ntBASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 AL161729.3-201ENST00000603533 673 ntBASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 AC245008.1-201ENST00000608123 476 ntBASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 AC026367.3-201ENST00000619032 590 ntBASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 AP003476.1-201ENST00000623984 516 ntBASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 AC017104.5-201ENST00000637647 639 ntBASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTF1AQ7RTS3 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 RNU6-670P-201ENST00000364312 104 ntBASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 RPL21P65-201ENST00000406094 466 ntBASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 HIGD1AP15-201ENST00000416198 280 ntBASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 MFSD13B-201ENST00000420133 1290 ntBASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 VN1R108P-201ENST00000431580 830 ntBASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 AC007389.2-201ENST00000434630 306 ntBASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 USP9YP28-201ENST00000435142 589 ntBASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 RPL7P33-201ENST00000444159 742 ntBASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 OR6C72P-201ENST00000451403 892 ntBASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 PRPF38AP1-201ENST00000451976 933 ntBASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 AC098799.3-201ENST00000506095 438 ntBASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 AC006499.6-201ENST00000511169 607 ntBASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 FTH1P21-201ENST00000512179 511 ntBASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 AP003355.1-201ENST00000518956 587 ntBASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 AC011270.1-201ENST00000558606 583 ntBASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 AC090666.1-201ENST00000578241 445 ntBASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 MIR4509-3-201ENST00000578671 94 ntBASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 MIR4509-2-201ENST00000583920 94 ntBASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 AL358072.1-201ENST00000604156 575 ntBASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 KATNBL1P5-201ENST00000605015 517 ntBASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 AL450336.1-201ENST00000605180 586 ntBASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 MIR4509-1-201ENST00000618224 94 ntBASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 uc_338.13-201ENST00000618243 179 ntBASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 CPHL1P-201ENST00000461341 3407 ntBASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.79□□□□□ -1.48
PTF1AQ7RTS3 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms