Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
EFNB3Q15768 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.41□□□□□ -1.7
EFNB3Q15768 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
EFNB3Q15768 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
EFNB3Q15768 AC005332.5-201ENST00000591222 2919 ntBASIC4.41□□□□□ -1.7
EFNB3Q15768 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
EFNB3Q15768 SGO1P1-201ENST00000603525 1447 ntBASIC4.41□□□□□ -1.7
EFNB3Q15768 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.41□□□□□ -1.7
EFNB3Q15768 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
EFNB3Q15768 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
EFNB3Q15768 SNORD116.1-201ENST00000365628 92 ntBASIC4.41□□□□□ -1.7
EFNB3Q15768 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
EFNB3Q15768 OR1L1-202ENST00000373686 1083 ntBASIC4.41□□□□□ -1.7
EFNB3Q15768 SNORA51.12-201ENST00000384448 134 ntBASIC4.41□□□□□ -1.7
EFNB3Q15768 MIR16-1-201ENST00000385271 89 ntBASIC4.41□□□□□ -1.7
EFNB3Q15768 RNU2-50P-201ENST00000410494 143 ntBASIC4.41□□□□□ -1.7
EFNB3Q15768 RNU6-575P-201ENST00000411326 105 ntBASIC4.41□□□□□ -1.7
EFNB3Q15768 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.41□□□□□ -1.7
EFNB3Q15768 SETP15-201ENST00000412724 337 ntBASIC4.41□□□□□ -1.7
EFNB3Q15768 NPM1P40-201ENST00000412758 733 ntBASIC4.41□□□□□ -1.7
EFNB3Q15768 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.41□□□□□ -1.7
EFNB3Q15768 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.41□□□□□ -1.7
EFNB3Q15768 MTCO1P3-201ENST00000429327 192 ntBASIC4.41□□□□□ -1.7
EFNB3Q15768 PSMD10P3-201ENST00000437000 448 ntBASIC4.41□□□□□ -1.7
EFNB3Q15768 FHP1-201ENST00000442741 703 ntBASIC4.41□□□□□ -1.7
EFNB3Q15768 SETD6P1-201ENST00000444575 317 ntBASIC4.41□□□□□ -1.7
EFNB3Q15768 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.41□□□□□ -1.7
EFNB3Q15768 NOP56P2-201ENST00000447491 769 ntBASIC4.41□□□□□ -1.7
EFNB3Q15768 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.41□□□□□ -1.7
EFNB3Q15768 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.41□□□□□ -1.7
EFNB3Q15768 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.41□□□□□ -1.7
EFNB3Q15768 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.41□□□□□ -1.7
EFNB3Q15768 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.41□□□□□ -1.7
EFNB3Q15768 RN7SL814P-201ENST00000487715 300 ntBASIC4.41□□□□□ -1.7
EFNB3Q15768 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.41□□□□□ -1.7
EFNB3Q15768 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.41□□□□□ -1.7
EFNB3Q15768 IGBP1P5-201ENST00000507524 1000 ntBASIC4.41□□□□□ -1.7
EFNB3Q15768 IGKV2-36-201ENST00000519999 223 ntBASIC4.41□□□□□ -1.7
EFNB3Q15768 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
EFNB3Q15768 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.41□□□□□ -1.7
EFNB3Q15768 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.41□□□□□ -1.7
EFNB3Q15768 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.41□□□□□ -1.7
EFNB3Q15768 BPTFP1-201ENST00000579209 492 ntBASIC4.41□□□□□ -1.7
EFNB3Q15768 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.41□□□□□ -1.7
EFNB3Q15768 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.41□□□□□ -1.7
EFNB3Q15768 AC011453.2-201ENST00000603737 729 ntBASIC4.41□□□□□ -1.7
EFNB3Q15768 AC011626.1-201ENST00000604710 562 ntBASIC4.41□□□□□ -1.7
EFNB3Q15768 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.41□□□□□ -1.7
EFNB3Q15768 AL049539.1-201ENST00000611964 459 ntBASIC4.41□□□□□ -1.7
EFNB3Q15768 EIF3FP1-201ENST00000613970 806 ntBASIC4.41□□□□□ -1.7
EFNB3Q15768 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.41□□□□□ -1.7
EFNB3Q15768 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.41□□□□□ -1.7
EFNB3Q15768 MIR1322-201ENST00000638013 71 ntBASIC4.41□□□□□ -1.7
EFNB3Q15768 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
EFNB3Q15768 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
EFNB3Q15768 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
EFNB3Q15768 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
EFNB3Q15768 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.41□□□□□ -1.7
EFNB3Q15768 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.41□□□□□ -1.7
EFNB3Q15768 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
EFNB3Q15768 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.41□□□□□ -1.7
EFNB3Q15768 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.41□□□□□ -1.7
EFNB3Q15768 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
EFNB3Q15768 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
EFNB3Q15768 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
EFNB3Q15768 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.4□□□□□ -1.7
EFNB3Q15768 AC025263.3-201ENST00000622965 1396 ntBASIC4.4□□□□□ -1.7
EFNB3Q15768 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
EFNB3Q15768 AC104118.1-201ENST00000607625 1589 ntBASIC4.4□□□□□ -1.7
EFNB3Q15768 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
EFNB3Q15768 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
EFNB3Q15768 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
EFNB3Q15768 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.4□□□□□ -1.7
EFNB3Q15768 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.4□□□□□ -1.7
EFNB3Q15768 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
EFNB3Q15768 AC104454.1-201ENST00000421341 1401 ntBASIC4.4□□□□□ -1.7
EFNB3Q15768 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
EFNB3Q15768 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.4□□□□□ -1.7
EFNB3Q15768 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
EFNB3Q15768 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
EFNB3Q15768 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
EFNB3Q15768 RN7SKP113-201ENST00000363891 295 ntBASIC4.4□□□□□ -1.71
EFNB3Q15768 RNU6-707P-201ENST00000364647 95 ntBASIC4.4□□□□□ -1.71
EFNB3Q15768 RN7SKP114-201ENST00000410327 279 ntBASIC4.4□□□□□ -1.71
EFNB3Q15768 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.4□□□□□ -1.71
EFNB3Q15768 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.4□□□□□ -1.71
EFNB3Q15768 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.4□□□□□ -1.71
EFNB3Q15768 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.4□□□□□ -1.71
EFNB3Q15768 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.4□□□□□ -1.71
EFNB3Q15768 RBMY2QP-201ENST00000429799 1147 ntBASIC4.4□□□□□ -1.71
EFNB3Q15768 RPL7P4-203ENST00000430239 730 ntBASIC4.4□□□□□ -1.71
EFNB3Q15768 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.4□□□□□ -1.71
EFNB3Q15768 RPL19P16-201ENST00000433839 588 ntBASIC4.4□□□□□ -1.71
EFNB3Q15768 GTF2IP7-202ENST00000436677 309 ntBASIC4.4□□□□□ -1.71
EFNB3Q15768 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.4□□□□□ -1.71
EFNB3Q15768 HMGB1P48-201ENST00000446155 598 ntBASIC4.4□□□□□ -1.71
EFNB3Q15768 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.4□□□□□ -1.71
EFNB3Q15768 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.4□□□□□ -1.71
EFNB3Q15768 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.4□□□□□ -1.71
EFNB3Q15768 AC090804.1-201ENST00000448870 490 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms