Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.7□□□□□ -1.82
UBA52P62987 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.7□□□□□ -1.82
UBA52P62987 AC109458.1-201ENST00000508858 316 ntBASIC3.7□□□□□ -1.82
UBA52P62987 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.7□□□□□ -1.82
UBA52P62987 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.7□□□□□ -1.82
UBA52P62987 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.7□□□□□ -1.82
UBA52P62987 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.7□□□□□ -1.82
UBA52P62987 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.7□□□□□ -1.82
UBA52P62987 SULT1C2P2-201ENST00000562517 294 ntBASIC3.7□□□□□ -1.82
UBA52P62987 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.7□□□□□ -1.82
UBA52P62987 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
UBA52P62987 IPO5P1-202ENST00000600039 287 ntBASIC3.7□□□□□ -1.82
UBA52P62987 MIR486-1-201ENST00000612171 68 ntBASIC3.7□□□□□ -1.82
UBA52P62987 AC024941.1-201ENST00000612250 334 ntBASIC3.7□□□□□ -1.82
UBA52P62987 AC114781.5-201ENST00000615297 108 ntBASIC3.7□□□□□ -1.82
UBA52P62987 ZYXP1-201ENST00000617638 118 ntBASIC3.7□□□□□ -1.82
UBA52P62987 AC007546.2-201ENST00000623996 360 ntBASIC3.7□□□□□ -1.82
UBA52P62987 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
UBA52P62987 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
UBA52P62987 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
UBA52P62987 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
UBA52P62987 MAPK10-373ENST00000641983 6772 ntBASIC3.7□□□□□ -1.82
UBA52P62987 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
UBA52P62987 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.69□□□□□ -1.82
UBA52P62987 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
UBA52P62987 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
UBA52P62987 NXPH1-205ENST00000602349 1953 ntBASIC3.69□□□□□ -1.82
UBA52P62987 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.69□□□□□ -1.82
UBA52P62987 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.69□□□□□ -1.82
UBA52P62987 MGP-201ENST00000228938 694 ntTSL 3 BASIC3.69□□□□□ -1.82
UBA52P62987 RNA5SP307-201ENST00000362863 116 ntBASIC3.69□□□□□ -1.82
UBA52P62987 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.69□□□□□ -1.82
UBA52P62987 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.69□□□□□ -1.82
UBA52P62987 AC122718.1-201ENST00000439448 744 ntBASIC3.69□□□□□ -1.82
UBA52P62987 CDC27P1-201ENST00000445384 715 ntBASIC3.69□□□□□ -1.82
UBA52P62987 EEF1A1P1-201ENST00000447052 739 ntBASIC3.69□□□□□ -1.82
UBA52P62987 NUTF2P3-201ENST00000448540 384 ntBASIC3.69□□□□□ -1.82
UBA52P62987 DDX39BP2-208ENST00000453923 258 ntBASIC3.69□□□□□ -1.82
UBA52P62987 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.69□□□□□ -1.82
UBA52P62987 FAM133DP-201ENST00000464802 691 ntBASIC3.69□□□□□ -1.82
UBA52P62987 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.69□□□□□ -1.82
UBA52P62987 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
UBA52P62987 RN7SL810P-201ENST00000493031 276 ntBASIC3.69□□□□□ -1.82
UBA52P62987 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.69□□□□□ -1.82
UBA52P62987 AC098799.3-201ENST00000506095 438 ntBASIC3.69□□□□□ -1.82
UBA52P62987 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.69□□□□□ -1.82
UBA52P62987 SNORA31.9-201ENST00000516429 84 ntBASIC3.69□□□□□ -1.82
UBA52P62987 HMGB1P23-201ENST00000518743 568 ntBASIC3.69□□□□□ -1.82
UBA52P62987 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.69□□□□□ -1.82
UBA52P62987 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.69□□□□□ -1.82
UBA52P62987 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.69□□□□□ -1.82
UBA52P62987 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.69□□□□□ -1.82
UBA52P62987 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.69□□□□□ -1.82
UBA52P62987 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.69□□□□□ -1.82
UBA52P62987 ADAD1P2-201ENST00000588476 646 ntBASIC3.69□□□□□ -1.82
UBA52P62987 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.69□□□□□ -1.82
UBA52P62987 AC015922.4-201ENST00000612568 690 ntBASIC3.69□□□□□ -1.82
UBA52P62987 AL161637.1-201ENST00000622380 412 ntBASIC3.69□□□□□ -1.82
UBA52P62987 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.69□□□□□ -1.82
UBA52P62987 AC074029.4-201ENST00000624796 1859 ntBASIC3.69□□□□□ -1.82
UBA52P62987 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
UBA52P62987 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
UBA52P62987 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.68□□□□□ -1.82
UBA52P62987 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
UBA52P62987 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.68□□□□□ -1.82
UBA52P62987 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.68□□□□□ -1.82
UBA52P62987 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
UBA52P62987 AC021146.4-201ENST00000309229 279 ntBASIC3.68□□□□□ -1.82
UBA52P62987 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
UBA52P62987 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
UBA52P62987 SNORA48.7-201ENST00000391302 135 ntBASIC3.68□□□□□ -1.82
UBA52P62987 RPL23AP59-201ENST00000399415 461 ntBASIC3.68□□□□□ -1.82
UBA52P62987 ST13P16-201ENST00000401760 781 ntBASIC3.68□□□□□ -1.82
UBA52P62987 AMZ2P2-201ENST00000406819 1057 ntBASIC3.68□□□□□ -1.82
UBA52P62987 SNORA74C-2-201ENST00000411179 201 ntBASIC3.68□□□□□ -1.82
UBA52P62987 AC011933.1-201ENST00000413334 321 ntBASIC3.68□□□□□ -1.82
UBA52P62987 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC3.68□□□□□ -1.82
UBA52P62987 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.68□□□□□ -1.82
UBA52P62987 RPS29P17-201ENST00000430795 166 ntBASIC3.68□□□□□ -1.82
UBA52P62987 AL356535.1-201ENST00000440335 398 ntBASIC3.68□□□□□ -1.82
UBA52P62987 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
UBA52P62987 TPTE2P3-201ENST00000441562 1189 ntBASIC3.68□□□□□ -1.82
UBA52P62987 YWHAQP9-201ENST00000445891 512 ntBASIC3.68□□□□□ -1.82
UBA52P62987 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.68□□□□□ -1.82
UBA52P62987 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.68□□□□□ -1.82
UBA52P62987 AL935212.3-201ENST00000450729 284 ntBASIC3.68□□□□□ -1.82
UBA52P62987 AC116533.1-201ENST00000459748 321 ntBASIC3.68□□□□□ -1.82
UBA52P62987 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.68□□□□□ -1.82
UBA52P62987 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.68□□□□□ -1.82
UBA52P62987 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.68□□□□□ -1.82
UBA52P62987 AC018797.3-201ENST00000513388 1241 ntBASIC3.68□□□□□ -1.82
UBA52P62987 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.68□□□□□ -1.82
UBA52P62987 NARSP2-201ENST00000518524 679 ntBASIC3.68□□□□□ -1.82
UBA52P62987 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
UBA52P62987 MRPL49P2-201ENST00000521066 465 ntBASIC3.68□□□□□ -1.82
UBA52P62987 RPL23AP97-201ENST00000568955 471 ntBASIC3.68□□□□□ -1.82
UBA52P62987 AC008785.1-201ENST00000624475 456 ntBASIC3.68□□□□□ -1.82
UBA52P62987 AP000843.1-201ENST00000624880 701 ntBASIC3.68□□□□□ -1.82
UBA52P62987 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
UBA52P62987 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms