Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AL109659.3-201ENST00000624985 950 ntBASIC5.8□□□□□ -1.48
RHBDL3P58872 AC004808.1-201ENST00000627671 721 ntBASIC5.8□□□□□ -1.48
RHBDL3P58872 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
RHBDL3P58872 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.8□□□□□ -1.48
RHBDL3P58872 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RHBDL3P58872 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.79□□□□□ -1.48
RHBDL3P58872 MAPK10-349ENST00000641767 3661 ntBASIC5.79□□□□□ -1.48
RHBDL3P58872 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RHBDL3P58872 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
RHBDL3P58872 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.79□□□□□ -1.48
RHBDL3P58872 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RHBDL3P58872 AL590240.1-201ENST00000334118 313 ntBASIC5.79□□□□□ -1.48
RHBDL3P58872 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.79□□□□□ -1.48
RHBDL3P58872 SNORA70F-201ENST00000384142 135 ntBASIC5.79□□□□□ -1.48
RHBDL3P58872 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC5.79□□□□□ -1.48
RHBDL3P58872 RPL37P1-201ENST00000432310 284 ntBASIC5.79□□□□□ -1.48
RHBDL3P58872 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.79□□□□□ -1.48
RHBDL3P58872 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RHBDL3P58872 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.79□□□□□ -1.48
RHBDL3P58872 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.79□□□□□ -1.48
RHBDL3P58872 CEACAMP6-201ENST00000452007 574 ntBASIC5.79□□□□□ -1.48
RHBDL3P58872 TPT1P1-201ENST00000458495 518 ntBASIC5.79□□□□□ -1.48
RHBDL3P58872 RN7SL354P-201ENST00000469282 294 ntBASIC5.79□□□□□ -1.48
RHBDL3P58872 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.79□□□□□ -1.48
RHBDL3P58872 AC015724.1-201ENST00000478577 156 ntBASIC5.79□□□□□ -1.48
RHBDL3P58872 AC069306.1-201ENST00000507006 843 ntBASIC5.79□□□□□ -1.48
RHBDL3P58872 C1GALT1P3-201ENST00000522049 819 ntBASIC5.79□□□□□ -1.48
RHBDL3P58872 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RHBDL3P58872 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.79□□□□□ -1.48
RHBDL3P58872 AC027455.1-201ENST00000574104 594 ntBASIC5.79□□□□□ -1.48
RHBDL3P58872 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.79□□□□□ -1.48
RHBDL3P58872 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.79□□□□□ -1.48
RHBDL3P58872 AC091488.1-201ENST00000604239 660 ntBASIC5.79□□□□□ -1.48
RHBDL3P58872 AL158050.2-201ENST00000605336 568 ntBASIC5.79□□□□□ -1.48
RHBDL3P58872 AL008729.2-201ENST00000606393 473 ntBASIC5.79□□□□□ -1.48
RHBDL3P58872 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.79□□□□□ -1.48
RHBDL3P58872 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.79□□□□□ -1.48
RHBDL3P58872 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
RHBDL3P58872 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RHBDL3P58872 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RHBDL3P58872 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RHBDL3P58872 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
RHBDL3P58872 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RHBDL3P58872 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.79□□□□□ -1.48
RHBDL3P58872 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RHBDL3P58872 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.78□□□□□ -1.48
RHBDL3P58872 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RHBDL3P58872 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RHBDL3P58872 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RHBDL3P58872 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RHBDL3P58872 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RHBDL3P58872 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RHBDL3P58872 MIR298-201ENST00000401212 88 ntBASIC5.78□□□□□ -1.48
RHBDL3P58872 AL049697.2-201ENST00000403708 294 ntBASIC5.78□□□□□ -1.48
RHBDL3P58872 RNU6-272P-201ENST00000411028 104 ntBASIC5.78□□□□□ -1.48
RHBDL3P58872 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.78□□□□□ -1.48
RHBDL3P58872 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.78□□□□□ -1.48
RHBDL3P58872 FABP7P1-201ENST00000424004 391 ntBASIC5.78□□□□□ -1.48
RHBDL3P58872 AL138785.1-201ENST00000425821 331 ntBASIC5.78□□□□□ -1.48
RHBDL3P58872 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.78□□□□□ -1.48
RHBDL3P58872 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.78□□□□□ -1.48
RHBDL3P58872 MRPL35P2-201ENST00000448009 511 ntBASIC5.78□□□□□ -1.48
RHBDL3P58872 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.78□□□□□ -1.48
RHBDL3P58872 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.78□□□□□ -1.48
RHBDL3P58872 HMGB1P38-201ENST00000490557 577 ntBASIC5.78□□□□□ -1.48
RHBDL3P58872 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.78□□□□□ -1.48
RHBDL3P58872 RAB9BP1-201ENST00000519581 626 ntBASIC5.78□□□□□ -1.48
RHBDL3P58872 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.78□□□□□ -1.48
RHBDL3P58872 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.78□□□□□ -1.48
RHBDL3P58872 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.78□□□□□ -1.48
RHBDL3P58872 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.78□□□□□ -1.48
RHBDL3P58872 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
RHBDL3P58872 MIR5699-201ENST00000578903 90 ntBASIC5.78□□□□□ -1.48
RHBDL3P58872 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.78□□□□□ -1.48
RHBDL3P58872 AL391834.2-201ENST00000609982 546 ntBASIC5.78□□□□□ -1.48
RHBDL3P58872 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.78□□□□□ -1.48
RHBDL3P58872 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RHBDL3P58872 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
RHBDL3P58872 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RHBDL3P58872 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RHBDL3P58872 AP001029.2-203ENST00000589795 4910 ntBASIC5.78□□□□□ -1.48
RHBDL3P58872 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
RHBDL3P58872 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RHBDL3P58872 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RHBDL3P58872 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.48
RHBDL3P58872 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
RHBDL3P58872 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.48
RHBDL3P58872 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RHBDL3P58872 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RHBDL3P58872 DHX40P1-201ENST00000588725 1412 ntBASIC5.77□□□□□ -1.49
RHBDL3P58872 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RHBDL3P58872 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RHBDL3P58872 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RHBDL3P58872 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.77□□□□□ -1.49
RHBDL3P58872 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.77□□□□□ -1.49
RHBDL3P58872 AC004022.2-201ENST00000413824 193 ntBASIC5.77□□□□□ -1.49
RHBDL3P58872 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RHBDL3P58872 MTCYBP15-201ENST00000433123 1127 ntBASIC5.77□□□□□ -1.49
RHBDL3P58872 AC105402.2-201ENST00000438503 358 ntBASIC5.77□□□□□ -1.49
RHBDL3P58872 RPS26P30-201ENST00000443431 335 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms