Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 DNAJC19P5-201ENST00000443295 316 ntBASIC6.57□□□□□ -1.36
USP11P51784 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC6.57□□□□□ -1.36
USP11P51784 FRG2FP-204ENST00000453982 852 ntBASIC6.57□□□□□ -1.36
USP11P51784 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC6.57□□□□□ -1.36
USP11P51784 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
USP11P51784 HMGN1P12-201ENST00000499125 195 ntBASIC6.57□□□□□ -1.36
USP11P51784 RNF138P1-201ENST00000502765 546 ntBASIC6.57□□□□□ -1.36
USP11P51784 AC106872.4-201ENST00000510050 523 ntBASIC6.57□□□□□ -1.36
USP11P51784 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.57□□□□□ -1.36
USP11P51784 PTGES3P3-201ENST00000511479 482 ntBASIC6.57□□□□□ -1.36
USP11P51784 SCARNA6.1-201ENST00000516989 238 ntBASIC6.57□□□□□ -1.36
USP11P51784 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
USP11P51784 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
USP11P51784 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.57□□□□□ -1.36
USP11P51784 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.57□□□□□ -1.36
USP11P51784 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.57□□□□□ -1.36
USP11P51784 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC6.57□□□□□ -1.36
USP11P51784 AC091489.2-201ENST00000566263 604 ntBASIC6.57□□□□□ -1.36
USP11P51784 AC012146.2-201ENST00000576545 416 ntBASIC6.57□□□□□ -1.36
USP11P51784 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC6.57□□□□□ -1.36
USP11P51784 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.57□□□□□ -1.36
USP11P51784 AC022432.1-201ENST00000595739 310 ntBASIC6.57□□□□□ -1.36
USP11P51784 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
USP11P51784 NANOGP3-201ENST00000605855 286 ntBASIC6.57□□□□□ -1.36
USP11P51784 AC135507.2-201ENST00000612443 309 ntBASIC6.57□□□□□ -1.36
USP11P51784 AL353726.1-201ENST00000614041 1000 ntBASIC6.57□□□□□ -1.36
USP11P51784 AP004607.9-201ENST00000618202 316 ntBASIC6.57□□□□□ -1.36
USP11P51784 AC010338.1-201ENST00000621823 717 ntBASIC6.57□□□□□ -1.36
USP11P51784 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC6.57□□□□□ -1.36
USP11P51784 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.57□□□□□ -1.36
USP11P51784 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
USP11P51784 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC6.57□□□□□ -1.36
USP11P51784 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
USP11P51784 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
USP11P51784 AC135352.1-201ENST00000506173 1418 ntBASIC6.57□□□□□ -1.36
USP11P51784 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
USP11P51784 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
USP11P51784 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
USP11P51784 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
USP11P51784 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.56□□□□□ -1.36
USP11P51784 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.56□□□□□ -1.36
USP11P51784 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
USP11P51784 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC6.56□□□□□ -1.36
USP11P51784 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
USP11P51784 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
USP11P51784 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
USP11P51784 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.56□□□□□ -1.36
USP11P51784 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
USP11P51784 AP004607.3-201ENST00000530354 3915 ntBASIC6.56□□□□□ -1.36
USP11P51784 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.56□□□□□ -1.36
USP11P51784 Y_RNA.263-201ENST00000364659 114 ntBASIC6.56□□□□□ -1.36
USP11P51784 RN7SKP292-201ENST00000365522 317 ntBASIC6.56□□□□□ -1.36
USP11P51784 AL357752.1-201ENST00000412817 349 ntBASIC6.56□□□□□ -1.36
USP11P51784 FABP7P1-201ENST00000424004 391 ntBASIC6.56□□□□□ -1.36
USP11P51784 NPM1P22-201ENST00000427761 952 ntBASIC6.56□□□□□ -1.36
USP11P51784 MTND6P12-201ENST00000428247 522 ntBASIC6.56□□□□□ -1.36
USP11P51784 AL365184.2-201ENST00000431139 435 ntBASIC6.56□□□□□ -1.36
USP11P51784 RPS29P14-201ENST00000431518 171 ntBASIC6.56□□□□□ -1.36
USP11P51784 HMGB1P45-201ENST00000435986 653 ntBASIC6.56□□□□□ -1.36
USP11P51784 AC244505.5-201ENST00000443639 207 ntBASIC6.56□□□□□ -1.36
USP11P51784 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC6.56□□□□□ -1.36
USP11P51784 RPL23AP35-201ENST00000451906 501 ntBASIC6.56□□□□□ -1.36
USP11P51784 MTCO3P11-201ENST00000455103 774 ntBASIC6.56□□□□□ -1.36
USP11P51784 AC018638.3-201ENST00000461273 132 ntBASIC6.56□□□□□ -1.36
USP11P51784 UBFD1P1-201ENST00000473259 814 ntBASIC6.56□□□□□ -1.36
USP11P51784 AC009120.1-201ENST00000493458 473 ntBASIC6.56□□□□□ -1.36
USP11P51784 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC6.56□□□□□ -1.36
USP11P51784 AC097173.1-201ENST00000505862 819 ntBASIC6.56□□□□□ -1.36
USP11P51784 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC6.56□□□□□ -1.36
USP11P51784 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC6.56□□□□□ -1.36
USP11P51784 AC105384.2-201ENST00000508433 640 ntBASIC6.56□□□□□ -1.36
USP11P51784 AC087808.1-201ENST00000520501 361 ntBASIC6.56□□□□□ -1.36
USP11P51784 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC6.56□□□□□ -1.36
USP11P51784 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.56□□□□□ -1.36
USP11P51784 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC6.56□□□□□ -1.36
USP11P51784 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.56□□□□□ -1.36
USP11P51784 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC6.56□□□□□ -1.36
USP11P51784 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC6.56□□□□□ -1.36
USP11P51784 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.56□□□□□ -1.36
USP11P51784 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.56□□□□□ -1.36
USP11P51784 VN1R79P-201ENST00000593540 513 ntBASIC6.56□□□□□ -1.36
USP11P51784 DUXAP4-201ENST00000603046 613 ntBASIC6.56□□□□□ -1.36
USP11P51784 AC008536.2-201ENST00000607284 349 ntBASIC6.56□□□□□ -1.36
USP11P51784 AC018816.2-201ENST00000621460 353 ntBASIC6.56□□□□□ -1.36
USP11P51784 RPL23AP61-201ENST00000623642 466 ntBASIC6.56□□□□□ -1.36
USP11P51784 AC009033.1-201ENST00000624279 431 ntBASIC6.56□□□□□ -1.36
USP11P51784 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
USP11P51784 AL137058.3-201ENST00000624531 3099 ntBASIC6.56□□□□□ -1.36
USP11P51784 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
USP11P51784 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.56□□□□□ -1.36
USP11P51784 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
USP11P51784 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.56□□□□□ -1.36
USP11P51784 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
USP11P51784 AL590763.1-201ENST00000398297 1545 ntBASIC6.55□□□□□ -1.36
USP11P51784 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
USP11P51784 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
USP11P51784 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
USP11P51784 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.55□□□□□ -1.36
USP11P51784 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
USP11P51784 AL159987.1-201ENST00000347911 293 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms