Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LHX1P48742 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LHX1P48742 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.74□□□□□ -1.65
LHX1P48742 RPS29P17-201ENST00000430795 166 ntBASIC4.74□□□□□ -1.65
LHX1P48742 AL035458.1-201ENST00000433096 585 ntBASIC4.74□□□□□ -1.65
LHX1P48742 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.74□□□□□ -1.65
LHX1P48742 RPS27P5-201ENST00000444247 244 ntBASIC4.74□□□□□ -1.65
LHX1P48742 VN1R32P-201ENST00000452234 905 ntBASIC4.74□□□□□ -1.65
LHX1P48742 CLIC4P1-201ENST00000453177 535 ntBASIC4.74□□□□□ -1.65
LHX1P48742 RPL10P17-201ENST00000453852 316 ntBASIC4.74□□□□□ -1.65
LHX1P48742 AL445433.1-201ENST00000457507 257 ntBASIC4.74□□□□□ -1.65
LHX1P48742 RNU7-27P-201ENST00000459281 62 ntBASIC4.74□□□□□ -1.65
LHX1P48742 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.74□□□□□ -1.65
LHX1P48742 RN7SL98P-201ENST00000462271 300 ntBASIC4.74□□□□□ -1.65
LHX1P48742 AC015908.1-201ENST00000478739 476 ntBASIC4.74□□□□□ -1.65
LHX1P48742 RPL23AP37-201ENST00000479658 549 ntBASIC4.74□□□□□ -1.65
LHX1P48742 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.74□□□□□ -1.65
LHX1P48742 AC016550.1-201ENST00000505348 785 ntBASIC4.74□□□□□ -1.65
LHX1P48742 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.74□□□□□ -1.65
LHX1P48742 AC010476.1-201ENST00000519111 851 ntBASIC4.74□□□□□ -1.65
LHX1P48742 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.74□□□□□ -1.65
LHX1P48742 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.74□□□□□ -1.65
LHX1P48742 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.74□□□□□ -1.65
LHX1P48742 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LHX1P48742 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.74□□□□□ -1.65
LHX1P48742 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LHX1P48742 AC023813.4-201ENST00000607580 580 ntBASIC4.74□□□□□ -1.65
LHX1P48742 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.74□□□□□ -1.65
LHX1P48742 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.74□□□□□ -1.65
LHX1P48742 MIR6891-201ENST00000618788 93 ntBASIC4.74□□□□□ -1.65
LHX1P48742 AC095038.2-201ENST00000621464 1070 ntBASIC4.74□□□□□ -1.65
LHX1P48742 AP003497.2-201ENST00000624220 967 ntBASIC4.74□□□□□ -1.65
LHX1P48742 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.74□□□□□ -1.65
LHX1P48742 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LHX1P48742 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LHX1P48742 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
LHX1P48742 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.74□□□□□ -1.65
LHX1P48742 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.74□□□□□ -1.65
LHX1P48742 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.74□□□□□ -1.65
LHX1P48742 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LHX1P48742 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LHX1P48742 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LHX1P48742 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.73□□□□□ -1.65
LHX1P48742 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.73□□□□□ -1.65
LHX1P48742 AC083843.3-201ENST00000623679 2186 ntBASIC4.73□□□□□ -1.65
LHX1P48742 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
LHX1P48742 AC126755.2-208ENST00000327792 462 ntBASIC4.73□□□□□ -1.65
LHX1P48742 AC138969.1-213ENST00000331436 462 ntBASIC4.73□□□□□ -1.65
LHX1P48742 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
LHX1P48742 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.73□□□□□ -1.65
LHX1P48742 RNU6-452P-201ENST00000384406 107 ntBASIC4.73□□□□□ -1.65
LHX1P48742 RNU6-185P-201ENST00000384421 107 ntBASIC4.73□□□□□ -1.65
LHX1P48742 VDAC1P9-201ENST00000412766 841 ntBASIC4.73□□□□□ -1.65
LHX1P48742 COX6CP17-201ENST00000421389 185 ntBASIC4.73□□□□□ -1.65
LHX1P48742 C4BPAP2-201ENST00000428434 478 ntBASIC4.73□□□□□ -1.65
LHX1P48742 MTCO1P52-201ENST00000433928 531 ntBASIC4.73□□□□□ -1.65
LHX1P48742 AC073143.1-201ENST00000436316 395 ntBASIC4.73□□□□□ -1.65
LHX1P48742 NPM1P33-201ENST00000438918 872 ntBASIC4.73□□□□□ -1.65
LHX1P48742 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.73□□□□□ -1.65
LHX1P48742 RPL34P26-201ENST00000445636 354 ntBASIC4.73□□□□□ -1.65
LHX1P48742 MOB1AP2-201ENST00000446060 614 ntBASIC4.73□□□□□ -1.65
LHX1P48742 PHBP16-201ENST00000446318 950 ntBASIC4.73□□□□□ -1.65
LHX1P48742 AL591623.2-201ENST00000449978 222 ntBASIC4.73□□□□□ -1.65
LHX1P48742 DHFRP3-201ENST00000455595 559 ntBASIC4.73□□□□□ -1.65
LHX1P48742 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.73□□□□□ -1.65
LHX1P48742 RPS20P4-201ENST00000461659 355 ntBASIC4.73□□□□□ -1.65
LHX1P48742 RPS23P7-201ENST00000466210 444 ntBASIC4.73□□□□□ -1.65
LHX1P48742 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.73□□□□□ -1.65
LHX1P48742 AC108022.1-201ENST00000493466 478 ntBASIC4.73□□□□□ -1.65
LHX1P48742 AC104629.1-201ENST00000494226 508 ntBASIC4.73□□□□□ -1.65
LHX1P48742 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.73□□□□□ -1.65
LHX1P48742 HMGN1P15-201ENST00000513870 295 ntBASIC4.73□□□□□ -1.65
LHX1P48742 AC108471.1-201ENST00000513977 287 ntBASIC4.73□□□□□ -1.65
LHX1P48742 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.73□□□□□ -1.65
LHX1P48742 OR8G5-201ENST00000524943 1041 ntBASIC4.73□□□□□ -1.65
LHX1P48742 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.73□□□□□ -1.65
LHX1P48742 AL109741.3-201ENST00000561748 592 ntBASIC4.73□□□□□ -1.65
LHX1P48742 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.73□□□□□ -1.65
LHX1P48742 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.73□□□□□ -1.65
LHX1P48742 AC090181.2-201ENST00000602975 672 ntBASIC4.73□□□□□ -1.65
LHX1P48742 AC103792.1-201ENST00000603591 919 ntBASIC4.73□□□□□ -1.65
LHX1P48742 AC079587.1-201ENST00000603846 277 ntBASIC4.73□□□□□ -1.65
LHX1P48742 AC091979.2-201ENST00000607514 214 ntBASIC4.73□□□□□ -1.65
LHX1P48742 uc_338.13-201ENST00000618243 179 ntBASIC4.73□□□□□ -1.65
LHX1P48742 AL121890.3-201ENST00000618494 516 ntBASIC4.73□□□□□ -1.65
LHX1P48742 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.73□□□□□ -1.65
LHX1P48742 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LHX1P48742 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LHX1P48742 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.73□□□□□ -1.65
LHX1P48742 CCT8P1-201ENST00000413611 1657 ntBASIC4.73□□□□□ -1.65
LHX1P48742 TTC39DP-201ENST00000416781 1688 ntBASIC4.73□□□□□ -1.65
LHX1P48742 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LHX1P48742 AC090017.1-201ENST00000548612 1779 ntBASIC4.73□□□□□ -1.65
LHX1P48742 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
LHX1P48742 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
LHX1P48742 HSPD1P14-201ENST00000432666 1618 ntBASIC4.72□□□□□ -1.65
LHX1P48742 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
LHX1P48742 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.72□□□□□ -1.65
LHX1P48742 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LHX1P48742 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms