Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.36□□□□□ -1.71
HMGCLP35914 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.36□□□□□ -1.71
HMGCLP35914 AC017104.4-201ENST00000636283 1592 ntBASIC4.36□□□□□ -1.71
HMGCLP35914 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HMGCLP35914 EIF2AP4-201ENST00000424793 1781 ntBASIC4.35□□□□□ -1.71
HMGCLP35914 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.35□□□□□ -1.71
HMGCLP35914 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HMGCLP35914 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.35□□□□□ -1.71
HMGCLP35914 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
HMGCLP35914 SNORA27.3-201ENST00000364937 134 ntBASIC4.35□□□□□ -1.71
HMGCLP35914 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HMGCLP35914 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
HMGCLP35914 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HMGCLP35914 RPL21P108-201ENST00000413857 481 ntBASIC4.35□□□□□ -1.71
HMGCLP35914 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.35□□□□□ -1.71
HMGCLP35914 AC009480.2-201ENST00000422916 432 ntBASIC4.35□□□□□ -1.71
HMGCLP35914 AL732292.1-201ENST00000426692 226 ntBASIC4.35□□□□□ -1.71
HMGCLP35914 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.35□□□□□ -1.71
HMGCLP35914 AC023141.6-201ENST00000429418 337 ntBASIC4.35□□□□□ -1.71
HMGCLP35914 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.35□□□□□ -1.71
HMGCLP35914 MTND4P15-201ENST00000437913 1033 ntBASIC4.35□□□□□ -1.71
HMGCLP35914 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.35□□□□□ -1.71
HMGCLP35914 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.35□□□□□ -1.71
HMGCLP35914 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.35□□□□□ -1.71
HMGCLP35914 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.35□□□□□ -1.71
HMGCLP35914 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.35□□□□□ -1.71
HMGCLP35914 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.35□□□□□ -1.71
HMGCLP35914 RPL35AP15-201ENST00000468042 339 ntBASIC4.35□□□□□ -1.71
HMGCLP35914 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.35□□□□□ -1.71
HMGCLP35914 RPS27AP16-201ENST00000492222 470 ntBASIC4.35□□□□□ -1.71
HMGCLP35914 AC083829.1-201ENST00000503756 657 ntBASIC4.35□□□□□ -1.71
HMGCLP35914 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.35□□□□□ -1.71
HMGCLP35914 COL6A4P2-205ENST00000509855 506 ntBASIC4.35□□□□□ -1.71
HMGCLP35914 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HMGCLP35914 AL352979.3-201ENST00000553515 247 ntBASIC4.35□□□□□ -1.71
HMGCLP35914 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.35□□□□□ -1.71
HMGCLP35914 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.35□□□□□ -1.71
HMGCLP35914 AC040174.2-201ENST00000602701 465 ntBASIC4.35□□□□□ -1.71
HMGCLP35914 AC074276.2-201ENST00000619891 348 ntBASIC4.35□□□□□ -1.71
HMGCLP35914 AC140479.6-201ENST00000633535 357 ntBASIC4.35□□□□□ -1.71
HMGCLP35914 AC091948.2-201ENST00000636510 279 ntBASIC4.35□□□□□ -1.71
HMGCLP35914 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HMGCLP35914 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.35□□□□□ -1.71
HMGCLP35914 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HMGCLP35914 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.35□□□□□ -1.71
HMGCLP35914 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HMGCLP35914 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.35□□□□□ -1.71
HMGCLP35914 AC105074.1-201ENST00000623380 3095 ntBASIC4.35□□□□□ -1.71
HMGCLP35914 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HMGCLP35914 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HMGCLP35914 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
HMGCLP35914 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HMGCLP35914 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.34□□□□□ -1.71
HMGCLP35914 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HMGCLP35914 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HMGCLP35914 RNA5SP175-201ENST00000364275 119 ntBASIC4.34□□□□□ -1.71
HMGCLP35914 RNU6-1251P-201ENST00000364502 107 ntBASIC4.34□□□□□ -1.71
HMGCLP35914 OR13C3-201ENST00000374781 1108 ntBASIC4.34□□□□□ -1.71
HMGCLP35914 AC097374.1-203ENST00000400783 485 ntBASIC4.34□□□□□ -1.71
HMGCLP35914 MIR1911-201ENST00000410783 80 ntBASIC4.34□□□□□ -1.71
HMGCLP35914 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.34□□□□□ -1.71
HMGCLP35914 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HMGCLP35914 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.34□□□□□ -1.71
HMGCLP35914 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.34□□□□□ -1.71
HMGCLP35914 EIF1P3-201ENST00000423841 334 ntBASIC4.34□□□□□ -1.71
HMGCLP35914 MTND4LP14-201ENST00000429447 288 ntBASIC4.34□□□□□ -1.71
HMGCLP35914 RPL12P46-201ENST00000436610 195 ntBASIC4.34□□□□□ -1.71
HMGCLP35914 FHP1-201ENST00000442741 703 ntBASIC4.34□□□□□ -1.71
HMGCLP35914 TPT1P13-201ENST00000449760 499 ntBASIC4.34□□□□□ -1.71
HMGCLP35914 AC133473.1-201ENST00000455173 299 ntBASIC4.34□□□□□ -1.71
HMGCLP35914 PCNAP1-201ENST00000505363 709 ntBASIC4.34□□□□□ -1.71
HMGCLP35914 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.34□□□□□ -1.71
HMGCLP35914 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.34□□□□□ -1.71
HMGCLP35914 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.34□□□□□ -1.71
HMGCLP35914 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.34□□□□□ -1.71
HMGCLP35914 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.34□□□□□ -1.71
HMGCLP35914 AC100770.1-201ENST00000532310 322 ntBASIC4.34□□□□□ -1.71
HMGCLP35914 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.34□□□□□ -1.71
HMGCLP35914 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.34□□□□□ -1.71
HMGCLP35914 AC007390.2-201ENST00000606229 3803 ntBASIC4.34□□□□□ -1.71
HMGCLP35914 LINC00216-201ENST00000623548 1126 ntBASIC4.34□□□□□ -1.71
HMGCLP35914 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.34□□□□□ -1.71
HMGCLP35914 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.34□□□□□ -1.71
HMGCLP35914 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.34□□□□□ -1.71
HMGCLP35914 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.34□□□□□ -1.71
HMGCLP35914 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
HMGCLP35914 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HMGCLP35914 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HMGCLP35914 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HMGCLP35914 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
HMGCLP35914 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HMGCLP35914 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
HMGCLP35914 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
HMGCLP35914 AL356489.2-201ENST00000566968 3528 ntBASIC4.34□□□□□ -1.72
HMGCLP35914 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
HMGCLP35914 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.34□□□□□ -1.72
HMGCLP35914 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HMGCLP35914 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
HMGCLP35914 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.33□□□□□ -1.72
HMGCLP35914 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms