Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 RPL21P47-201ENST00000483696 477 ntBASIC5.28□□□□□ -1.56
CIITAP33076 AC008897.1-201ENST00000494006 347 ntBASIC5.28□□□□□ -1.56
CIITAP33076 MTND4LP2-201ENST00000502312 285 ntBASIC5.28□□□□□ -1.56
CIITAP33076 AC021146.5-201ENST00000503544 545 ntBASIC5.28□□□□□ -1.56
CIITAP33076 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.28□□□□□ -1.56
CIITAP33076 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.28□□□□□ -1.56
CIITAP33076 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC5.28□□□□□ -1.56
CIITAP33076 RN7SKP287-201ENST00000516546 266 ntBASIC5.28□□□□□ -1.56
CIITAP33076 AC091163.3-201ENST00000518269 1144 ntBASIC5.28□□□□□ -1.56
CIITAP33076 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.28□□□□□ -1.56
CIITAP33076 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.28□□□□□ -1.56
CIITAP33076 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.28□□□□□ -1.56
CIITAP33076 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CIITAP33076 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.28□□□□□ -1.56
CIITAP33076 MTND3P12-201ENST00000559068 328 ntBASIC5.28□□□□□ -1.56
CIITAP33076 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.28□□□□□ -1.56
CIITAP33076 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.28□□□□□ -1.56
CIITAP33076 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.28□□□□□ -1.56
CIITAP33076 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.28□□□□□ -1.56
CIITAP33076 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.28□□□□□ -1.56
CIITAP33076 AC093424.1-201ENST00000604999 338 ntBASIC5.28□□□□□ -1.56
CIITAP33076 AC099785.1-201ENST00000605697 437 ntBASIC5.28□□□□□ -1.56
CIITAP33076 AL157392.4-201ENST00000609756 345 ntBASIC5.28□□□□□ -1.56
CIITAP33076 uc_338.18-201ENST00000615451 175 ntBASIC5.28□□□□□ -1.56
CIITAP33076 Z99129.2-201ENST00000619967 314 ntBASIC5.28□□□□□ -1.56
CIITAP33076 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.28□□□□□ -1.56
CIITAP33076 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.28□□□□□ -1.56
CIITAP33076 U3.53-201ENST00000628922 216 ntBASIC5.28□□□□□ -1.56
CIITAP33076 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
CIITAP33076 MAPK10-304ENST00000641341 3984 ntBASIC5.28□□□□□ -1.56
CIITAP33076 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.28□□□□□ -1.56
CIITAP33076 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CIITAP33076 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.27□□□□□ -1.57
CIITAP33076 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CIITAP33076 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CIITAP33076 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.27□□□□□ -1.57
CIITAP33076 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
CIITAP33076 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CIITAP33076 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.27□□□□□ -1.57
CIITAP33076 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.27□□□□□ -1.57
CIITAP33076 ZNF137P-201ENST00000456718 1920 ntBASIC5.27□□□□□ -1.57
CIITAP33076 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CIITAP33076 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CIITAP33076 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CIITAP33076 AC234772.1-201ENST00000377927 937 ntBASIC5.27□□□□□ -1.57
CIITAP33076 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CIITAP33076 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CIITAP33076 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CIITAP33076 UBE2V1P9-201ENST00000414760 368 ntBASIC5.27□□□□□ -1.57
CIITAP33076 RPL26P29-201ENST00000415623 438 ntBASIC5.27□□□□□ -1.57
CIITAP33076 AC119751.6-201ENST00000416712 186 ntBASIC5.27□□□□□ -1.57
CIITAP33076 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.27□□□□□ -1.57
CIITAP33076 NDUFA5P10-201ENST00000432147 357 ntBASIC5.27□□□□□ -1.57
CIITAP33076 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.27□□□□□ -1.57
CIITAP33076 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.27□□□□□ -1.57
CIITAP33076 ARF4P4-201ENST00000439608 520 ntBASIC5.27□□□□□ -1.57
CIITAP33076 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.27□□□□□ -1.57
CIITAP33076 SCARNA10-201ENST00000459255 330 ntBASIC5.27□□□□□ -1.57
CIITAP33076 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.27□□□□□ -1.57
CIITAP33076 MTCO2P6-201ENST00000463134 685 ntBASIC5.27□□□□□ -1.57
CIITAP33076 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.27□□□□□ -1.57
CIITAP33076 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.27□□□□□ -1.57
CIITAP33076 MTCYBP35-201ENST00000503630 1137 ntBASIC5.27□□□□□ -1.57
CIITAP33076 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.27□□□□□ -1.57
CIITAP33076 AC112673.1-201ENST00000513168 575 ntBASIC5.27□□□□□ -1.57
CIITAP33076 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.27□□□□□ -1.57
CIITAP33076 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.27□□□□□ -1.57
CIITAP33076 MTND2P38-201ENST00000522536 667 ntBASIC5.27□□□□□ -1.57
CIITAP33076 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.27□□□□□ -1.57
CIITAP33076 AL132857.1-201ENST00000555180 708 ntBASIC5.27□□□□□ -1.57
CIITAP33076 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.27□□□□□ -1.57
CIITAP33076 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.27□□□□□ -1.57
CIITAP33076 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.27□□□□□ -1.57
CIITAP33076 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CIITAP33076 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.27□□□□□ -1.57
CIITAP33076 AC019226.2-201ENST00000625973 424 ntBASIC5.27□□□□□ -1.57
CIITAP33076 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CIITAP33076 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CIITAP33076 AC092079.1-201ENST00000558620 1985 ntBASIC5.27□□□□□ -1.57
CIITAP33076 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CIITAP33076 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CIITAP33076 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.27□□□□□ -1.57
CIITAP33076 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
CIITAP33076 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CIITAP33076 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.27□□□□□ -1.57
CIITAP33076 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.27□□□□□ -1.57
CIITAP33076 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CIITAP33076 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.26□□□□□ -1.57
CIITAP33076 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CIITAP33076 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CIITAP33076 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CIITAP33076 AC000374.1-201ENST00000434698 1745 ntBASIC5.26□□□□□ -1.57
CIITAP33076 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CIITAP33076 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CIITAP33076 MTND5P11-201ENST00000511037 1812 ntBASIC5.26□□□□□ -1.57
CIITAP33076 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CIITAP33076 AC021146.4-201ENST00000309229 279 ntBASIC5.26□□□□□ -1.57
CIITAP33076 VDAC2P1-201ENST00000399358 958 ntBASIC5.26□□□□□ -1.57
CIITAP33076 RPS3AP23-201ENST00000401762 784 ntBASIC5.26□□□□□ -1.57
CIITAP33076 ZNF602P-201ENST00000405929 924 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms