Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AL121782.1-201ENST00000611242 413 ntBASIC6.97□□□□□ -1.29
VARSP26640 AC130324.3-201ENST00000614165 542 ntBASIC6.97□□□□□ -1.29
VARSP26640 FAM157A-202ENST00000615155 405 ntBASIC6.97□□□□□ -1.29
VARSP26640 AC079949.2-201ENST00000617117 2933 ntBASIC6.97□□□□□ -1.29
VARSP26640 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC6.97□□□□□ -1.29
VARSP26640 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC6.97□□□□□ -1.29
VARSP26640 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
VARSP26640 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
VARSP26640 AL049641.1-201ENST00000441055 1948 ntBASIC6.97□□□□□ -1.29
VARSP26640 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC6.97□□□□□ -1.29
VARSP26640 KARSP2-201ENST00000415696 1639 ntBASIC6.97□□□□□ -1.29
VARSP26640 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.97□□□□□ -1.29
VARSP26640 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
VARSP26640 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
VARSP26640 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.97□□□□□ -1.29
VARSP26640 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.97□□□□□ -1.29
VARSP26640 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
VARSP26640 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
VARSP26640 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.96□□□□□ -1.29
VARSP26640 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.96□□□□□ -1.29
VARSP26640 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
VARSP26640 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.96□□□□□ -1.29
VARSP26640 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
VARSP26640 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
VARSP26640 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
VARSP26640 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
VARSP26640 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
VARSP26640 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
VARSP26640 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
VARSP26640 RNU6-238P-201ENST00000363313 106 ntBASIC6.96□□□□□ -1.3
VARSP26640 RNU4-7P-201ENST00000364758 141 ntBASIC6.96□□□□□ -1.3
VARSP26640 Y_RNA.307-201ENST00000365022 117 ntBASIC6.96□□□□□ -1.3
VARSP26640 RNU4-66P-201ENST00000365199 138 ntBASIC6.96□□□□□ -1.3
VARSP26640 U3.14-201ENST00000365363 227 ntBASIC6.96□□□□□ -1.3
VARSP26640 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
VARSP26640 RNU6-606P-201ENST00000384721 111 ntBASIC6.96□□□□□ -1.3
VARSP26640 MIR551B-201ENST00000384984 96 ntBASIC6.96□□□□□ -1.3
VARSP26640 RNU6-1055P-201ENST00000391085 107 ntBASIC6.96□□□□□ -1.3
VARSP26640 AL596448.1-201ENST00000415024 392 ntBASIC6.96□□□□□ -1.3
VARSP26640 PRUNEP1-201ENST00000425846 705 ntBASIC6.96□□□□□ -1.3
VARSP26640 CYP4F32P-201ENST00000426492 504 ntBASIC6.96□□□□□ -1.3
VARSP26640 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.96□□□□□ -1.3
VARSP26640 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC6.96□□□□□ -1.3
VARSP26640 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC6.96□□□□□ -1.3
VARSP26640 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC6.96□□□□□ -1.3
VARSP26640 RGS5-220ENST00000528689 566 ntTSL 5 BASIC6.96□□□□□ -1.3
VARSP26640 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
VARSP26640 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
VARSP26640 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
VARSP26640 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.96□□□□□ -1.3
VARSP26640 AC011193.2-201ENST00000582638 367 ntBASIC6.96□□□□□ -1.3
VARSP26640 MIR5690-201ENST00000583739 73 ntBASIC6.96□□□□□ -1.3
VARSP26640 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.96□□□□□ -1.3
VARSP26640 AC010463.3-201ENST00000594077 500 ntBASIC6.96□□□□□ -1.3
VARSP26640 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.96□□□□□ -1.3
VARSP26640 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.96□□□□□ -1.3
VARSP26640 AL355333.1-201ENST00000605632 279 ntBASIC6.96□□□□□ -1.3
VARSP26640 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC6.96□□□□□ -1.3
VARSP26640 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC6.96□□□□□ -1.3
VARSP26640 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC6.96□□□□□ -1.3
VARSP26640 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
VARSP26640 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
VARSP26640 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
VARSP26640 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
VARSP26640 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
VARSP26640 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.96□□□□□ -1.3
VARSP26640 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
VARSP26640 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.96□□□□□ -1.3
VARSP26640 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
VARSP26640 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
VARSP26640 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
VARSP26640 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC6.96□□□□□ -1.3
VARSP26640 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
VARSP26640 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.95□□□□□ -1.3
VARSP26640 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.95□□□□□ -1.3
VARSP26640 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
VARSP26640 AC132219.2-201ENST00000624416 2327 ntBASIC6.95□□□□□ -1.3
VARSP26640 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
VARSP26640 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
VARSP26640 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
VARSP26640 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.95□□□□□ -1.3
VARSP26640 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
VARSP26640 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
VARSP26640 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.95□□□□□ -1.3
VARSP26640 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
VARSP26640 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
VARSP26640 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
VARSP26640 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.95□□□□□ -1.3
VARSP26640 RNU6-1188P-201ENST00000363795 107 ntBASIC6.95□□□□□ -1.3
VARSP26640 AC090114.1-201ENST00000393266 448 ntBASIC6.95□□□□□ -1.3
VARSP26640 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
VARSP26640 HMGB1P17-201ENST00000403495 628 ntBASIC6.95□□□□□ -1.3
VARSP26640 AL034374.1-201ENST00000406329 351 ntBASIC6.95□□□□□ -1.3
VARSP26640 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC6.95□□□□□ -1.3
VARSP26640 RPS10P21-201ENST00000430654 475 ntBASIC6.95□□□□□ -1.3
VARSP26640 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC6.95□□□□□ -1.3
VARSP26640 AL356121.1-201ENST00000442911 156 ntBASIC6.95□□□□□ -1.3
VARSP26640 AL356133.1-201ENST00000444762 372 ntBASIC6.95□□□□□ -1.3
VARSP26640 RPS23P9-201ENST00000448848 438 ntBASIC6.95□□□□□ -1.3
VARSP26640 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms