Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 POLR2KP1-201ENST00000553226 168 ntBASIC5.13□□□□□ -1.59
MMP8P22894 AL049839.1-201ENST00000556151 657 ntBASIC5.13□□□□□ -1.59
MMP8P22894 AP005262.1-201ENST00000582646 997 ntBASIC5.13□□□□□ -1.59
MMP8P22894 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.13□□□□□ -1.59
MMP8P22894 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
MMP8P22894 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.13□□□□□ -1.59
MMP8P22894 AC004223.2-201ENST00000590309 544 ntBASIC5.13□□□□□ -1.59
MMP8P22894 OR7E18P-201ENST00000592589 702 ntBASIC5.13□□□□□ -1.59
MMP8P22894 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.13□□□□□ -1.59
MMP8P22894 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.13□□□□□ -1.59
MMP8P22894 AC007349.4-201ENST00000608114 532 ntBASIC5.13□□□□□ -1.59
MMP8P22894 AC074140.1-201ENST00000621617 208 ntBASIC5.13□□□□□ -1.59
MMP8P22894 AC017037.3-201ENST00000625016 472 ntBASIC5.13□□□□□ -1.59
MMP8P22894 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
MMP8P22894 DHX9P1-201ENST00000436565 3076 ntBASIC5.13□□□□□ -1.59
MMP8P22894 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.13□□□□□ -1.59
MMP8P22894 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
MMP8P22894 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
MMP8P22894 RARSP1-201ENST00000542842 1418 ntBASIC5.13□□□□□ -1.59
MMP8P22894 CASC19-206ENST00000641028 1430 ntBASIC5.13□□□□□ -1.59
MMP8P22894 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
MMP8P22894 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.13□□□□□ -1.59
MMP8P22894 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.13□□□□□ -1.59
MMP8P22894 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
MMP8P22894 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
MMP8P22894 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
MMP8P22894 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.12□□□□□ -1.59
MMP8P22894 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
MMP8P22894 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
MMP8P22894 AC133552.1-201ENST00000569988 4007 ntBASIC5.12□□□□□ -1.59
MMP8P22894 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
MMP8P22894 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.12□□□□□ -1.59
MMP8P22894 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
MMP8P22894 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.12□□□□□ -1.59
MMP8P22894 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
MMP8P22894 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
MMP8P22894 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
MMP8P22894 RN7SKP104-201ENST00000362605 328 ntBASIC5.12□□□□□ -1.59
MMP8P22894 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.12□□□□□ -1.59
MMP8P22894 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
MMP8P22894 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
MMP8P22894 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
MMP8P22894 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.12□□□□□ -1.59
MMP8P22894 AL008987.1-201ENST00000415528 237 ntBASIC5.12□□□□□ -1.59
MMP8P22894 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.12□□□□□ -1.59
MMP8P22894 HMGB1P49-201ENST00000418882 569 ntBASIC5.12□□□□□ -1.59
MMP8P22894 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.12□□□□□ -1.59
MMP8P22894 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.12□□□□□ -1.59
MMP8P22894 AC234064.1-201ENST00000436312 247 ntBASIC5.12□□□□□ -1.59
MMP8P22894 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.12□□□□□ -1.59
MMP8P22894 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.12□□□□□ -1.59
MMP8P22894 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.12□□□□□ -1.59
MMP8P22894 AL929288.2-201ENST00000446368 407 ntBASIC5.12□□□□□ -1.59
MMP8P22894 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.12□□□□□ -1.59
MMP8P22894 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.12□□□□□ -1.59
MMP8P22894 AC091959.2-201ENST00000477363 321 ntBASIC5.12□□□□□ -1.59
MMP8P22894 AP000563.1-201ENST00000490865 758 ntBASIC5.12□□□□□ -1.59
MMP8P22894 AC020890.1-201ENST00000491837 504 ntBASIC5.12□□□□□ -1.59
MMP8P22894 RPL5P23-201ENST00000496040 868 ntBASIC5.12□□□□□ -1.59
MMP8P22894 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.12□□□□□ -1.59
MMP8P22894 AC093890.1-201ENST00000502554 540 ntBASIC5.12□□□□□ -1.59
MMP8P22894 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.12□□□□□ -1.59
MMP8P22894 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.12□□□□□ -1.59
MMP8P22894 AC108471.1-201ENST00000513977 287 ntBASIC5.12□□□□□ -1.59
MMP8P22894 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.12□□□□□ -1.59
MMP8P22894 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.12□□□□□ -1.59
MMP8P22894 GCSHP4-201ENST00000538792 439 ntBASIC5.12□□□□□ -1.59
MMP8P22894 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.12□□□□□ -1.59
MMP8P22894 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.12□□□□□ -1.59
MMP8P22894 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.12□□□□□ -1.59
MMP8P22894 RN7SL435P-201ENST00000584418 282 ntBASIC5.12□□□□□ -1.59
MMP8P22894 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.12□□□□□ -1.59
MMP8P22894 BNIP3P24-201ENST00000593398 557 ntBASIC5.12□□□□□ -1.59
MMP8P22894 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.12□□□□□ -1.59
MMP8P22894 AL353778.1-201ENST00000603149 408 ntBASIC5.12□□□□□ -1.59
MMP8P22894 AC020910.3-201ENST00000603701 874 ntBASIC5.12□□□□□ -1.59
MMP8P22894 BNIP3P4-201ENST00000604946 565 ntBASIC5.12□□□□□ -1.59
MMP8P22894 AL121932.1-201ENST00000605542 214 ntBASIC5.12□□□□□ -1.59
MMP8P22894 AC016877.3-201ENST00000606778 504 ntBASIC5.12□□□□□ -1.59
MMP8P22894 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.12□□□□□ -1.59
MMP8P22894 AC055764.2-201ENST00000610089 670 ntBASIC5.12□□□□□ -1.59
MMP8P22894 AC091905.4-201ENST00000623432 202 ntBASIC5.12□□□□□ -1.59
MMP8P22894 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.12□□□□□ -1.59
MMP8P22894 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.12□□□□□ -1.59
MMP8P22894 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
MMP8P22894 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
MMP8P22894 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.12□□□□□ -1.59
MMP8P22894 AC100871.1-201ENST00000507871 1456 ntBASIC5.12□□□□□ -1.59
MMP8P22894 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
MMP8P22894 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
MMP8P22894 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
MMP8P22894 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
MMP8P22894 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
MMP8P22894 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
MMP8P22894 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
MMP8P22894 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.11□□□□□ -1.59
MMP8P22894 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.11□□□□□ -1.59
MMP8P22894 AL606537.1-201ENST00000607258 2011 ntBASIC5.11□□□□□ -1.59
MMP8P22894 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.11□□□□□ -1.59
MMP8P22894 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms