Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.83□□□□□ -1.8
USF1P22415 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.83□□□□□ -1.8
USF1P22415 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.83□□□□□ -1.8
USF1P22415 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
USF1P22415 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
USF1P22415 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC3.83□□□□□ -1.8
USF1P22415 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
USF1P22415 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.82□□□□□ -1.8
USF1P22415 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
USF1P22415 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.82□□□□□ -1.8
USF1P22415 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
USF1P22415 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
USF1P22415 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
USF1P22415 AC012020.1-201ENST00000624541 1728 ntBASIC3.82□□□□□ -1.8
USF1P22415 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
USF1P22415 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
USF1P22415 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
USF1P22415 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
USF1P22415 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
USF1P22415 AC011155.1-201ENST00000316512 456 ntBASIC3.82□□□□□ -1.8
USF1P22415 RNU6-819P-201ENST00000364116 107 ntBASIC3.82□□□□□ -1.8
USF1P22415 RNU6-304P-201ENST00000364855 107 ntBASIC3.82□□□□□ -1.8
USF1P22415 SNORA57.1-201ENST00000391227 145 ntBASIC3.82□□□□□ -1.8
USF1P22415 AL607077.1-201ENST00000401718 499 ntBASIC3.82□□□□□ -1.8
USF1P22415 AMZ2P2-201ENST00000406819 1057 ntBASIC3.82□□□□□ -1.8
USF1P22415 VDAC1P9-201ENST00000412766 841 ntBASIC3.82□□□□□ -1.8
USF1P22415 AC009237.10-201ENST00000414112 510 ntBASIC3.82□□□□□ -1.8
USF1P22415 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC3.82□□□□□ -1.8
USF1P22415 RPS12P10-201ENST00000427031 377 ntBASIC3.82□□□□□ -1.8
USF1P22415 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.82□□□□□ -1.8
USF1P22415 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC3.82□□□□□ -1.8
USF1P22415 RPL12P46-201ENST00000436610 195 ntBASIC3.82□□□□□ -1.8
USF1P22415 AC092013.1-201ENST00000438795 332 ntBASIC3.82□□□□□ -1.8
USF1P22415 NUTF2P3-201ENST00000448540 384 ntBASIC3.82□□□□□ -1.8
USF1P22415 AC005008.1-201ENST00000456151 612 ntBASIC3.82□□□□□ -1.8
USF1P22415 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
USF1P22415 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
USF1P22415 SNORA31.9-201ENST00000516429 84 ntBASIC3.82□□□□□ -1.8
USF1P22415 VTA1P2-201ENST00000520205 911 ntBASIC3.82□□□□□ -1.8
USF1P22415 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.82□□□□□ -1.8
USF1P22415 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC3.82□□□□□ -1.8
USF1P22415 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.82□□□□□ -1.8
USF1P22415 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
USF1P22415 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.82□□□□□ -1.8
USF1P22415 AC021483.2-201ENST00000567415 758 ntBASIC3.82□□□□□ -1.8
USF1P22415 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.82□□□□□ -1.8
USF1P22415 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.82□□□□□ -1.8
USF1P22415 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.82□□□□□ -1.8
USF1P22415 IMMP1LP1-201ENST00000605170 488 ntBASIC3.82□□□□□ -1.8
USF1P22415 AC090948.2-201ENST00000607363 564 ntBASIC3.82□□□□□ -1.8
USF1P22415 AC114781.5-201ENST00000615297 108 ntBASIC3.82□□□□□ -1.8
USF1P22415 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.82□□□□□ -1.8
USF1P22415 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.82□□□□□ -1.8
USF1P22415 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
USF1P22415 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
USF1P22415 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
USF1P22415 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
USF1P22415 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
USF1P22415 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.81□□□□□ -1.8
USF1P22415 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.81□□□□□ -1.8
USF1P22415 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
USF1P22415 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.81□□□□□ -1.8
USF1P22415 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.81□□□□□ -1.8
USF1P22415 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
USF1P22415 AC018529.3-201ENST00000624212 2254 ntBASIC3.81□□□□□ -1.8
USF1P22415 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
USF1P22415 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
USF1P22415 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
USF1P22415 EEF1A1P42-201ENST00000613436 1331 ntBASIC3.81□□□□□ -1.8
USF1P22415 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
USF1P22415 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
USF1P22415 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
USF1P22415 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
USF1P22415 RPS26P8-201ENST00000393490 348 ntBASIC3.81□□□□□ -1.8
USF1P22415 RPL23AP59-201ENST00000399415 461 ntBASIC3.81□□□□□ -1.8
USF1P22415 MIR921-201ENST00000401133 56 ntBASIC3.81□□□□□ -1.8
USF1P22415 ARL4AP5-201ENST00000404372 599 ntBASIC3.81□□□□□ -1.8
USF1P22415 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.81□□□□□ -1.8
USF1P22415 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.81□□□□□ -1.8
USF1P22415 RN7SKP27-201ENST00000410684 333 ntBASIC3.81□□□□□ -1.8
USF1P22415 RNA5SP146-201ENST00000410743 123 ntBASIC3.81□□□□□ -1.8
USF1P22415 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.81□□□□□ -1.8
USF1P22415 RPL21P108-201ENST00000413857 481 ntBASIC3.81□□□□□ -1.8
USF1P22415 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
USF1P22415 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
USF1P22415 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.81□□□□□ -1.8
USF1P22415 RPS20P1-201ENST00000434853 354 ntBASIC3.81□□□□□ -1.8
USF1P22415 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.81□□□□□ -1.8
USF1P22415 ACTR3P2-201ENST00000439585 1257 ntBASIC3.81□□□□□ -1.8
USF1P22415 RPL23AP93-201ENST00000440847 484 ntBASIC3.81□□□□□ -1.8
USF1P22415 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
USF1P22415 RPL7P32-201ENST00000457119 744 ntBASIC3.81□□□□□ -1.8
USF1P22415 RNU6-1218P-201ENST00000458990 108 ntBASIC3.81□□□□□ -1.8
USF1P22415 AC020898.1-201ENST00000474167 787 ntBASIC3.81□□□□□ -1.8
USF1P22415 RPL23AP65-201ENST00000475608 468 ntBASIC3.81□□□□□ -1.8
USF1P22415 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
USF1P22415 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
USF1P22415 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.81□□□□□ -1.8
USF1P22415 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.81□□□□□ -1.8
USF1P22415 AC093824.1-201ENST00000508796 343 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms