Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
TPM1P09493 AC022893.2-201ENST00000564832 3296 ntBASIC4.64□□□□□ -1.67
TPM1P09493 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.64□□□□□ -1.67
TPM1P09493 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.64□□□□□ -1.67
TPM1P09493 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.64□□□□□ -1.67
TPM1P09493 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.64□□□□□ -1.67
TPM1P09493 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.64□□□□□ -1.67
TPM1P09493 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
TPM1P09493 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.64□□□□□ -1.67
TPM1P09493 AC103591.2-201ENST00000265259 766 ntBASIC4.64□□□□□ -1.67
TPM1P09493 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
TPM1P09493 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TPM1P09493 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TPM1P09493 AL138785.1-201ENST00000425821 331 ntBASIC4.64□□□□□ -1.67
TPM1P09493 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.64□□□□□ -1.67
TPM1P09493 ATP5HP2-201ENST00000433885 485 ntBASIC4.64□□□□□ -1.67
TPM1P09493 AC093716.1-201ENST00000435923 377 ntBASIC4.64□□□□□ -1.67
TPM1P09493 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TPM1P09493 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.64□□□□□ -1.67
TPM1P09493 MTCYBP14-201ENST00000457471 715 ntBASIC4.64□□□□□ -1.67
TPM1P09493 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.64□□□□□ -1.67
TPM1P09493 BNIP3P41-201ENST00000503774 571 ntBASIC4.64□□□□□ -1.67
TPM1P09493 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.64□□□□□ -1.67
TPM1P09493 AC108471.1-201ENST00000513977 287 ntBASIC4.64□□□□□ -1.67
TPM1P09493 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.64□□□□□ -1.67
TPM1P09493 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.64□□□□□ -1.67
TPM1P09493 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.64□□□□□ -1.67
TPM1P09493 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.64□□□□□ -1.67
TPM1P09493 PSMA6P4-201ENST00000603247 718 ntBASIC4.64□□□□□ -1.67
TPM1P09493 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.64□□□□□ -1.67
TPM1P09493 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.64□□□□□ -1.67
TPM1P09493 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.64□□□□□ -1.67
TPM1P09493 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
TPM1P09493 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TPM1P09493 BRAFP1-201ENST00000445336 2703 ntBASIC4.64□□□□□ -1.67
TPM1P09493 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TPM1P09493 BDP1P-201ENST00000582658 1990 ntBASIC4.64□□□□□ -1.67
TPM1P09493 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
TPM1P09493 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.63□□□□□ -1.67
TPM1P09493 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
TPM1P09493 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TPM1P09493 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TPM1P09493 MIR1183-201ENST00000408856 89 ntBASIC4.63□□□□□ -1.67
TPM1P09493 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.63□□□□□ -1.67
TPM1P09493 UQCRBP1-201ENST00000421129 336 ntBASIC4.63□□□□□ -1.67
TPM1P09493 AC008072.1-201ENST00000434254 824 ntBASIC4.63□□□□□ -1.67
TPM1P09493 HMGB3P21-201ENST00000452483 547 ntBASIC4.63□□□□□ -1.67
TPM1P09493 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.63□□□□□ -1.67
TPM1P09493 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.63□□□□□ -1.67
TPM1P09493 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TPM1P09493 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.63□□□□□ -1.67
TPM1P09493 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.63□□□□□ -1.67
TPM1P09493 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.63□□□□□ -1.67
TPM1P09493 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.63□□□□□ -1.67
TPM1P09493 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.63□□□□□ -1.67
TPM1P09493 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.63□□□□□ -1.67
TPM1P09493 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.63□□□□□ -1.67
TPM1P09493 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.63□□□□□ -1.67
TPM1P09493 MIR4716-201ENST00000579628 84 ntBASIC4.63□□□□□ -1.67
TPM1P09493 AL445222.1-201ENST00000607259 628 ntBASIC4.63□□□□□ -1.67
TPM1P09493 AC128687.2-201ENST00000609657 566 ntBASIC4.63□□□□□ -1.67
TPM1P09493 AC064801.1-201ENST00000612025 407 ntBASIC4.63□□□□□ -1.67
TPM1P09493 MIR486-1-201ENST00000612171 68 ntBASIC4.63□□□□□ -1.67
TPM1P09493 AC009318.3-201ENST00000616916 503 ntBASIC4.63□□□□□ -1.67
TPM1P09493 AC007546.1-201ENST00000619452 559 ntBASIC4.63□□□□□ -1.67
TPM1P09493 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.63□□□□□ -1.67
TPM1P09493 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.63□□□□□ -1.67
TPM1P09493 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TPM1P09493 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.63□□□□□ -1.67
TPM1P09493 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
TPM1P09493 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.63□□□□□ -1.67
TPM1P09493 AC009951.1-201ENST00000623674 2614 ntBASIC4.62□□□□□ -1.67
TPM1P09493 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
TPM1P09493 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TPM1P09493 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.62□□□□□ -1.67
TPM1P09493 AL049697.2-201ENST00000403708 294 ntBASIC4.62□□□□□ -1.67
TPM1P09493 AL450992.3-201ENST00000413192 568 ntBASIC4.62□□□□□ -1.67
TPM1P09493 MTCYBP7-201ENST00000419540 1134 ntBASIC4.62□□□□□ -1.67
TPM1P09493 RPL7AP25-201ENST00000423357 805 ntBASIC4.62□□□□□ -1.67
TPM1P09493 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.62□□□□□ -1.67
TPM1P09493 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.62□□□□□ -1.67
TPM1P09493 AC011998.1-201ENST00000433403 117 ntBASIC4.62□□□□□ -1.67
TPM1P09493 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.62□□□□□ -1.67
TPM1P09493 RPL7P31-201ENST00000450192 724 ntBASIC4.62□□□□□ -1.67
TPM1P09493 HIGD1AP8-201ENST00000453927 274 ntBASIC4.62□□□□□ -1.67
TPM1P09493 RPL23AP81-201ENST00000455252 467 ntBASIC4.62□□□□□ -1.67
TPM1P09493 DHFRP3-201ENST00000455595 559 ntBASIC4.62□□□□□ -1.67
TPM1P09493 RPS29P19-201ENST00000479709 171 ntBASIC4.62□□□□□ -1.67
TPM1P09493 RN7SL629P-201ENST00000489622 285 ntBASIC4.62□□□□□ -1.67
TPM1P09493 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
TPM1P09493 NARSP2-201ENST00000518524 679 ntBASIC4.62□□□□□ -1.67
TPM1P09493 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.62□□□□□ -1.67
TPM1P09493 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.62□□□□□ -1.67
TPM1P09493 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.62□□□□□ -1.67
TPM1P09493 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.62□□□□□ -1.67
TPM1P09493 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.62□□□□□ -1.67
TPM1P09493 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.62□□□□□ -1.67
TPM1P09493 AC100847.1-201ENST00000611316 481 ntBASIC4.62□□□□□ -1.67
TPM1P09493 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.62□□□□□ -1.67
TPM1P09493 AL035461.2-201ENST00000619201 524 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms