Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DPB1P04440 AC083899.2-201ENST00000423285 1376 ntBASIC3.79□□□□□ -1.8
HLA-DPB1P04440 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC3.79□□□□□ -1.8
HLA-DPB1P04440 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DPB1P04440 MFSD8-216ENST00000641147 4009 ntBASIC3.79□□□□□ -1.8
HLA-DPB1P04440 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HLA-DPB1P04440 FAM3C2-201ENST00000312214 681 ntBASIC3.79□□□□□ -1.8
HLA-DPB1P04440 OR52B1P-201ENST00000316506 909 ntBASIC3.79□□□□□ -1.8
HLA-DPB1P04440 RNU1-130P-201ENST00000363930 160 ntBASIC3.79□□□□□ -1.8
HLA-DPB1P04440 RNU6-1251P-201ENST00000364502 107 ntBASIC3.79□□□□□ -1.8
HLA-DPB1P04440 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.79□□□□□ -1.8
HLA-DPB1P04440 RNU6-152P-201ENST00000384037 107 ntBASIC3.79□□□□□ -1.8
HLA-DPB1P04440 MIR3065-201ENST00000390137 79 ntBASIC3.79□□□□□ -1.8
HLA-DPB1P04440 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DPB1P04440 AP000357.1-201ENST00000409926 1165 ntBASIC3.79□□□□□ -1.8
HLA-DPB1P04440 RPS12P5-201ENST00000423449 371 ntBASIC3.79□□□□□ -1.8
HLA-DPB1P04440 MTND4LP13-201ENST00000425022 298 ntBASIC3.79□□□□□ -1.8
HLA-DPB1P04440 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DPB1P04440 AL356535.1-201ENST00000440335 398 ntBASIC3.79□□□□□ -1.8
HLA-DPB1P04440 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DPB1P04440 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DPB1P04440 AL591363.1-201ENST00000450091 483 ntBASIC3.79□□□□□ -1.8
HLA-DPB1P04440 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DPB1P04440 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DPB1P04440 AC133473.1-201ENST00000455173 299 ntBASIC3.79□□□□□ -1.8
HLA-DPB1P04440 AL133244.1-201ENST00000456007 258 ntBASIC3.79□□□□□ -1.8
HLA-DPB1P04440 RN7SL459P-201ENST00000481078 302 ntBASIC3.79□□□□□ -1.8
HLA-DPB1P04440 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DPB1P04440 AC104164.2-201ENST00000496953 495 ntBASIC3.79□□□□□ -1.8
HLA-DPB1P04440 BNIP3P41-201ENST00000503774 571 ntBASIC3.79□□□□□ -1.8
HLA-DPB1P04440 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DPB1P04440 AC109458.1-201ENST00000508858 316 ntBASIC3.79□□□□□ -1.8
HLA-DPB1P04440 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DPB1P04440 CDH12P4-201ENST00000517835 295 ntBASIC3.79□□□□□ -1.8
HLA-DPB1P04440 CDH12P3-201ENST00000517935 295 ntBASIC3.79□□□□□ -1.8
HLA-DPB1P04440 CDH12P1-201ENST00000518435 295 ntBASIC3.79□□□□□ -1.8
HLA-DPB1P04440 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.79□□□□□ -1.8
HLA-DPB1P04440 AC006064.5-201ENST00000541782 248 ntBASIC3.79□□□□□ -1.8
HLA-DPB1P04440 CD24P2-201ENST00000565486 219 ntBASIC3.79□□□□□ -1.8
HLA-DPB1P04440 AC122134.1-201ENST00000565664 1104 ntBASIC3.79□□□□□ -1.8
HLA-DPB1P04440 AC020914.4-201ENST00000597690 277 ntBASIC3.79□□□□□ -1.8
HLA-DPB1P04440 AP003392.5-201ENST00000607857 415 ntBASIC3.79□□□□□ -1.8
HLA-DPB1P04440 AC128687.2-201ENST00000609657 566 ntBASIC3.79□□□□□ -1.8
HLA-DPB1P04440 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DPB1P04440 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DPB1P04440 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.79□□□□□ -1.8
HLA-DPB1P04440 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
HLA-DPB1P04440 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DPB1P04440 LINC02471-203ENST00000641941 4752 ntBASIC3.79□□□□□ -1.8
HLA-DPB1P04440 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DPB1P04440 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
HLA-DPB1P04440 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DPB1P04440 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
HLA-DPB1P04440 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DPB1P04440 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HLA-DPB1P04440 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HLA-DPB1P04440 MIR129-1-201ENST00000384972 72 ntBASIC3.78□□□□□ -1.8
HLA-DPB1P04440 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HLA-DPB1P04440 AL034403.1-201ENST00000399414 885 ntBASIC3.78□□□□□ -1.8
HLA-DPB1P04440 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
HLA-DPB1P04440 MIR1179-201ENST00000408703 91 ntBASIC3.78□□□□□ -1.8
HLA-DPB1P04440 TMSB10P2-201ENST00000416049 131 ntBASIC3.78□□□□□ -1.8
HLA-DPB1P04440 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.78□□□□□ -1.8
HLA-DPB1P04440 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.78□□□□□ -1.8
HLA-DPB1P04440 AC093716.1-201ENST00000435923 377 ntBASIC3.78□□□□□ -1.8
HLA-DPB1P04440 AL589765.3-201ENST00000446084 462 ntBASIC3.78□□□□□ -1.8
HLA-DPB1P04440 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC3.78□□□□□ -1.8
HLA-DPB1P04440 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DPB1P04440 RPL7P22-201ENST00000466005 733 ntBASIC3.78□□□□□ -1.8
HLA-DPB1P04440 RPL35AP15-201ENST00000468042 339 ntBASIC3.78□□□□□ -1.8
HLA-DPB1P04440 AC069499.1-201ENST00000489433 509 ntBASIC3.78□□□□□ -1.8
HLA-DPB1P04440 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DPB1P04440 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DPB1P04440 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DPB1P04440 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.78□□□□□ -1.8
HLA-DPB1P04440 IGKV2-38-201ENST00000517443 247 ntBASIC3.78□□□□□ -1.8
HLA-DPB1P04440 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DPB1P04440 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DPB1P04440 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.78□□□□□ -1.8
HLA-DPB1P04440 AL109766.1-201ENST00000555080 552 ntBASIC3.78□□□□□ -1.8
HLA-DPB1P04440 AC027176.2-201ENST00000559166 746 ntBASIC3.78□□□□□ -1.8
HLA-DPB1P04440 AC092868.3-201ENST00000560515 784 ntBASIC3.78□□□□□ -1.8
HLA-DPB1P04440 AC068020.1-201ENST00000594215 661 ntBASIC3.78□□□□□ -1.8
HLA-DPB1P04440 AP001160.4-201ENST00000596971 382 ntBASIC3.78□□□□□ -1.8
HLA-DPB1P04440 AC234771.5-201ENST00000600161 514 ntBASIC3.78□□□□□ -1.8
HLA-DPB1P04440 AC115286.1-201ENST00000604298 434 ntBASIC3.78□□□□□ -1.8
HLA-DPB1P04440 AC012409.3-201ENST00000611343 981 ntBASIC3.78□□□□□ -1.8
HLA-DPB1P04440 MIR6820-201ENST00000611508 62 ntBASIC3.78□□□□□ -1.8
HLA-DPB1P04440 AL133370.2-201ENST00000619934 439 ntBASIC3.78□□□□□ -1.8
HLA-DPB1P04440 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DPB1P04440 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DPB1P04440 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DPB1P04440 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DPB1P04440 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.81
HLA-DPB1P04440 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.81
HLA-DPB1P04440 AC027228.2-201ENST00000567141 2154 ntBASIC3.78□□□□□ -1.81
HLA-DPB1P04440 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DPB1P04440 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC3.77□□□□□ -1.81
HLA-DPB1P04440 AC018529.3-201ENST00000624212 2254 ntBASIC3.77□□□□□ -1.81
HLA-DPB1P04440 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms