Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 CASC19-204ENST00000641001 2055 ntBASIC4.75□□□□□ -1.65
VTNP04004 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VTNP04004 AC110792.3-201ENST00000595906 1614 ntBASIC4.75□□□□□ -1.65
VTNP04004 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
VTNP04004 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VTNP04004 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VTNP04004 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
VTNP04004 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.74□□□□□ -1.65
VTNP04004 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VTNP04004 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.74□□□□□ -1.65
VTNP04004 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VTNP04004 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.74□□□□□ -1.65
VTNP04004 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.74□□□□□ -1.65
VTNP04004 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
VTNP04004 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VTNP04004 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.74□□□□□ -1.65
VTNP04004 RNU1-94P-201ENST00000362627 173 ntBASIC4.74□□□□□ -1.65
VTNP04004 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
VTNP04004 SNORA57.1-201ENST00000391227 145 ntBASIC4.74□□□□□ -1.65
VTNP04004 ATP5F1P2-201ENST00000398143 760 ntBASIC4.74□□□□□ -1.65
VTNP04004 SNORA74C-2-201ENST00000411179 201 ntBASIC4.74□□□□□ -1.65
VTNP04004 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.74□□□□□ -1.65
VTNP04004 COX6CP15-201ENST00000426313 211 ntBASIC4.74□□□□□ -1.65
VTNP04004 BTF3P10-201ENST00000433415 495 ntBASIC4.74□□□□□ -1.65
VTNP04004 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.74□□□□□ -1.65
VTNP04004 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.74□□□□□ -1.65
VTNP04004 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.74□□□□□ -1.65
VTNP04004 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC4.74□□□□□ -1.65
VTNP04004 OR9N1P-202ENST00000494289 481 ntBASIC4.74□□□□□ -1.65
VTNP04004 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.74□□□□□ -1.65
VTNP04004 MTCO1P31-201ENST00000506355 492 ntBASIC4.74□□□□□ -1.65
VTNP04004 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.74□□□□□ -1.65
VTNP04004 HMGB1P46-201ENST00000520062 610 ntBASIC4.74□□□□□ -1.65
VTNP04004 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VTNP04004 RN7SL600P-201ENST00000581811 299 ntBASIC4.74□□□□□ -1.65
VTNP04004 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.74□□□□□ -1.65
VTNP04004 SNX18P1Y-201ENST00000616231 511 ntBASIC4.74□□□□□ -1.65
VTNP04004 AC090506.2-201ENST00000624521 419 ntBASIC4.74□□□□□ -1.65
VTNP04004 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.74□□□□□ -1.65
VTNP04004 AC097461.1-201ENST00000568928 2821 ntBASIC4.74□□□□□ -1.65
VTNP04004 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.74□□□□□ -1.65
VTNP04004 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.74□□□□□ -1.65
VTNP04004 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.74□□□□□ -1.65
VTNP04004 AL606537.1-201ENST00000607258 2011 ntBASIC4.73□□□□□ -1.65
VTNP04004 AP001642.1-201ENST00000624727 2117 ntBASIC4.73□□□□□ -1.65
VTNP04004 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VTNP04004 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
VTNP04004 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VTNP04004 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.73□□□□□ -1.65
VTNP04004 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VTNP04004 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
VTNP04004 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VTNP04004 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.73□□□□□ -1.65
VTNP04004 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.73□□□□□ -1.65
VTNP04004 MTCYBP7-201ENST00000419540 1134 ntBASIC4.73□□□□□ -1.65
VTNP04004 MTND4P24-201ENST00000424002 397 ntBASIC4.73□□□□□ -1.65
VTNP04004 AC073508.1-201ENST00000428866 656 ntBASIC4.73□□□□□ -1.65
VTNP04004 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VTNP04004 COX6B1P7-201ENST00000430845 235 ntBASIC4.73□□□□□ -1.65
VTNP04004 RPL34P6-201ENST00000432390 345 ntBASIC4.73□□□□□ -1.65
VTNP04004 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.73□□□□□ -1.65
VTNP04004 SDR42E1P3-201ENST00000438345 502 ntBASIC4.73□□□□□ -1.65
VTNP04004 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.73□□□□□ -1.65
VTNP04004 AL031584.1-201ENST00000447169 754 ntBASIC4.73□□□□□ -1.65
VTNP04004 RPS20P4-201ENST00000461659 355 ntBASIC4.73□□□□□ -1.65
VTNP04004 AC112206.1-201ENST00000468416 477 ntBASIC4.73□□□□□ -1.65
VTNP04004 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
VTNP04004 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.73□□□□□ -1.65
VTNP04004 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.73□□□□□ -1.65
VTNP04004 RPS27AP13-201ENST00000498403 237 ntBASIC4.73□□□□□ -1.65
VTNP04004 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.73□□□□□ -1.65
VTNP04004 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.73□□□□□ -1.65
VTNP04004 KCTD9P2-201ENST00000512203 1013 ntBASIC4.73□□□□□ -1.65
VTNP04004 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.73□□□□□ -1.65
VTNP04004 MIR2116-201ENST00000517221 80 ntBASIC4.73□□□□□ -1.65
VTNP04004 AC092451.2-201ENST00000538746 658 ntBASIC4.73□□□□□ -1.65
VTNP04004 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.73□□□□□ -1.65
VTNP04004 AL352979.3-201ENST00000553515 247 ntBASIC4.73□□□□□ -1.65
VTNP04004 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.73□□□□□ -1.65
VTNP04004 BNIP3P5-201ENST00000562290 498 ntBASIC4.73□□□□□ -1.65
VTNP04004 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.73□□□□□ -1.65
VTNP04004 AC122134.1-201ENST00000565664 1104 ntBASIC4.73□□□□□ -1.65
VTNP04004 AC027455.1-201ENST00000574104 594 ntBASIC4.73□□□□□ -1.65
VTNP04004 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.73□□□□□ -1.65
VTNP04004 RNF138P2-201ENST00000603490 592 ntBASIC4.73□□□□□ -1.65
VTNP04004 AC024941.1-201ENST00000612250 334 ntBASIC4.73□□□□□ -1.65
VTNP04004 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.73□□□□□ -1.65
VTNP04004 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
VTNP04004 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
VTNP04004 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
VTNP04004 VPS35P1-201ENST00000563400 1518 ntBASIC4.72□□□□□ -1.65
VTNP04004 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VTNP04004 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.72□□□□□ -1.65
VTNP04004 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.72□□□□□ -1.65
VTNP04004 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VTNP04004 MAPK10-303ENST00000641324 3959 ntBASIC4.72□□□□□ -1.65
VTNP04004 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VTNP04004 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
VTNP04004 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
VTNP04004 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms